Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12075 ATGGTTGCTGTCAAGAGTTGCATCTACCTGGATTGTTATCATGTGGAACATGGAAATTCTTCCAGTAAAGCAAGCTCAAAGGAATCGGAACGAATTGACAGTCTATTTTATTCGTACGCCAATGCATCTACTGGGTTAATTGATCCAGAAGGAATTGAAGCACTTTGTGCTGATATGGAGGTGGATCATACTGATGTGAGGATTTTGATGCTTGCGTGGAAAATGAAATCTGAGGAGCAAGGATATTTTACTGTGGATGAGTGGAGAAGAGGTTTAAAGGCACTAAGGGCTGATACAGTTAGTAAATTGAAGAAGGCACTTGCAGACCTAGAAAAGGAGGTGAGGAGGCCATCAAATTTTGCAGATTTCTATTCTTATGCTTTCCAATATTGTCTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAATTACTTAATCTTGTTTTGGGTTCAACATTTCCAGCCCAAGTCAACTTATTTGTGGAATATTTGAAGGTAAATAAAGAGTTTCGCATTATTGTTGCTCAAAATGATTACAAAGTCATAAACATGGATCAATGGATGGGATTTTTCCGGTTTTGCAATGAGATAAGTTTCCCAATGCTTGATAACTATGATCCTGAACTTGCCTGGCCCTTGATCCTGGATAATTTCGTTGAATGGTTGCGAGAAAAGCAAAATTAA 696 0.3807 MVAVKSCIYLDCYHVEHGNSSSKASSKESERIDSLFYSYANASTGLIDPEGIEALCADMEVDHTDVRILMLAWKMKSEEQGYFTVDEWRRGLKALRADTVSKLKKALADLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDIESICELLNLVLGSTFPAQVNLFVEYLKVNKEFRIIVAQNDYKVINMDQWMGFFRFCNEISFPMLDNYDPELAWPLILDNFVEWLREKQN. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12075 231 Gene3D Cullin, PONY binding domain 117 231 IPR042460 -
Seca4g12075 231 ProSiteProfiles DCUN1 domain profile. 27 227 IPR005176 -
Seca4g12075 231 FunFam Defective in cullin neddylation protein 25 115 - -
Seca4g12075 231 Pfam Cullin binding 102 225 IPR005176 -
Seca4g12075 231 PANTHER RP42 RELATED 18 231 IPR014764 -
Seca4g12075 231 Gene3D - 25 115 - -
Seca4g12075 231 FunFam Defective in cullin neddylation protein 117 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12075 Seca-Chr4 261659819 261663261 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12075 K17824 - gmx:100776788 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g12075 4 261659819 261663261 Seca4g12075 4 261659819 261663261 ECH