Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12045 ATGGCTTTGAGAAACGTGACTGCAAGGCTGGGCAATAAACTCTTCCCTCTGTTATCTTCCACTTCCACTTCCACTTCCACTTCCAAGCTGCTACATTCTCACGCCACCAGTTTCGGATTCAAACATGTAAACGAAGAAGAAAAGGCCCGCATGGTCGGTGATGTGTTCACGAGCGTTGCTGAAAGCTACGATTTCATGAATGATCTAATGAGTGCTGGACTGCATAGATTGTGGAAGGATAGGCTAGTTTCAATGCTGAATCCTTTTCCTGGAATGAAACATCTTGATGTGGCTGGTGGCACAGGGGATGTTGCTTTTAGAATCTTGGAGAACATAAACAGAGTTAAGCAGAGAGGACTTCGAGATGTTTTTGAAGATACTTTAGAGGCAGAAACTAGGATATATGTATGTGACATTAACCCTAACATGTTGAACGTTGGCAAACAGCGGGCCTTGGAAAAGGGTTTTGGAGAAGATGGTTGCCTTGTATGGGTGGAGGGAAATGCTGAAAGATTGAGTTTCCAAAATGATTCAATGGATGGTTACACTATTGCATTTGGGATAAGGAATGTTACGCACATAGAGAAAGTTCTTAGTGAAGCTCATAGGGTGTTGAAACCTGGAGGAAGGTTCCTTTGCCTTGAACTAAGCCATGTTGGTATCCCTTTATTTAAAGAATTGTATGACTATTATTCTTTCTCAGTTATTCCATACATGGGAGAACTGGTTGCCGGTGATCGGGAATCCTATCAGTACTTAGTTGAGAGTATCCGACGTTTCCCTACGCAGGAAAAATTTGCATCGATGATTGCGGATGCTGGGTTCCAGAAAGTAGAGTATGAGAATCTAGTTGGGGGAGTGGTTGCCATCCATTCAGGGCTGAAAATCTGA 891 0.431 MALRNVTARLGNKLFPLLSSTSTSTSTSKLLHSHATSFGFKHVNEEEKARMVGDVFTSVAESYDFMNDLMSAGLHRLWKDRLVSMLNPFPGMKHLDVAGGTGDVAFRILENINRVKQRGLRDVFEDTLEAETRIYVCDINPNMLNVGKQRALEKGFGEDGCLVWVEGNAERLSFQNDSMDGYTIAFGIRNVTHIEKVLSEAHRVLKPGGRFLCLELSHVGIPLFKELYDYYSFSVIPYMGELVAGDRESYQYLVESIRRFPTQEKFASMIADAGFQKVEYENLVGGVVAIHSGLKI. 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12045 296 Gene3D Vaccinia Virus protein VP39 58 296 IPR029063 -
Seca4g12045 296 Pfam ubiE/COQ5 methyltransferase family 47 295 - -
Seca4g12045 296 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 63 78 IPR023576 GO:0008168
Seca4g12045 296 FunFam 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial 58 296 - -
Seca4g12045 296 ProSitePatterns ubiE/COQ5 methyltransferase family signature 2. 203 217 IPR023576 GO:0008168
Seca4g12045 296 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 47 295 IPR004033 GO:0008168
Seca4g12045 296 PANTHER METHYLTRANSFERASE 46 279 - -
Seca4g12045 296 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 290 IPR029063 -
Seca4g12045 296 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 43 295 IPR004033 GO:0008168
Seca4g12045 296 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 52 295 IPR004033 GO:0008168
Seca4g12045 296 CDD AdoMet_MTases 93 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12045 Seca-Chr4 261266139 261269435 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12045 K06127 - gmx:100794692 519.235