Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12039 ATGGCTTCAAACAATAACGCCACCACCCTTCACTCACCGACTTATGGATCCGACCCGACAACGCCCAACACCACCTTCGTCCAAGCCGACCCATCAAACTTCCGGGCCGTGGTCCAGAAACTAACTGGAGCATCCGAAGACCCGTCCGCTCAGAAACTTCCCCTCACTCTCCCCTCGCGCCTCGCAGCCCAAGCCCACCGCCCACCTCCCACCGAGATAATGGGCCCAAAGAAGCCCAACTTCAAGCTCCACGAGCGTCGAAACGCGGCGTCGAAGAAGCTGGAATTGAGCATCGGGGGTTTAGAGAGACCGATGATGAATATGGTGATGTCGTCACCTTCTTCTTCTTCTTCATATTATCGAAGCAGCAGAGGAGCGTTGTTGATGGGAGAAGGAGTGGTGATGGCTTCGCCGGTTTCACCGTTGGAGTTGTTGGCGCGTGGAAGTCCTCGAACGCCAAAGTCACCACATGAAGAAGAAGAAGAGAGAGTGATAGCAGAGAAAGGGTTCTATTTGCACCCAATTAGTCCTCTGTCGTCAACTCCAAGAGCTTCTCAACCTCCTGAGCTATTGCCACTCTTCCCTTTGCACTCTCCTTCCTCTCACAATTCTCCTTCTTCTAATTACTCCTAA 633 0.5292 MASNNNATTLHSPTYGSDPTTPNTTFVQADPSNFRAVVQKLTGASEDPSAQKLPLTLPSRLAAQAHRPPPTEIMGPKKPNFKLHERRNAASKKLELSIGGLERPMMNMVMSSPSSSSSYYRSSRGALLMGEGVVMASPVSPLELLARGSPRTPKSPHEEEEERVIAEKGFYLHPISPLSSTPRASQPPELLPLFPLHSPSSHNSPSSNYS. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12039 210 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 5 202 IPR039611 -
Seca4g12039 210 MobiDBLite consensus disorder prediction 1 31 - -
Seca4g12039 210 MobiDBLite consensus disorder prediction 145 210 - -
Seca4g12039 210 Pfam VQ motif 21 48 IPR008889 -
Seca4g12039 210 MobiDBLite consensus disorder prediction 152 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12039 Seca-Chr4 261198384 261199016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12039 - - var:108320542 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g12039 4 261198384 261199016 Seca4g12039 4 261198384 261199016 ECH