Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12021 ATGAACGGCGGCGCCGCCCCTCCCTCTGGTGACGCCTCCCTCGTCGTCAAGCGCAGGCGCAGCCCCCAAAAGGTTCCTGTTAACGGCGTTAAGGTAACAGATCAACCCTCTTGCGGTGGCGCTATGGCGAAGAACTCTGTGCACTGCTCTGACGCCTCTTTCATGAAATGGACCTTCGCCGATGTTGTACACGTGGCGACACACCATTGGATACCTTGTTTGTTCGCTCTGGGCCTTCTCTTCTTCATGGCGGTGGAGTACACGCTCCTCATGGTGCCATCGTCGTCACCGCCGTTCGATTTGGGTTTCCTTGCCACGCGCTCCCTCCATCGCGTGCTCGAGTCGTCGCCGCAGCTCAACACTCTCTTGGCCGCTCTCAATACGGTGTTTGTGGGAATGCAAACGAGTTATATCTTATGGACATGGTTGATTGAAGGACGCCCTAGAGCCACAATCTCAGCACTCTTCATGTTCACATGTCGTGGGATTTTGGGCTACTCCACCCAGCTCCCATTGCCTCAGGGGTTTTTGGGTTCGGGTGTGGACTTCCCTGTTGGCAACGTGTCGTTCTTTTTGTTTTTTTCTGGGCATGTGGCGGGGTCGATGATTGCTTCCTTGGACATGAGGAGGATGCAGAGGTGGGAGCTTGCATGGACTTTTGATGCGCTGAATGTGTTGCAAGCTGTGAGGTTGCTGGGTACGAGAGGTCACTACACTATTGATTTGGCTGTTGGGGTTGGTGCTGGCATTCTTTTTGATTCTTTAGCTGATGAAATTGAAAGCTCTTCTACTACGGTTTCCGTTGCTCCCGAAAAGCCGAGGAGTAGTGAAAGTGATCATGGCCGAACCAGAGACGAAGACTCTGAGAGTGAGAAACAACAACAGGAAATGGATTGGAAAACCGACGAAGAATTTAAGAAGTTCATGGGCAACCCTTCTATCGAAGCAGCGATCAAGCTGGAGAAGAAGAGAGCTGATAGGAAGCTCAAGGAGCTTGACAGGGAAAGCACCACCAATAACCCAATTCTGTCTCTCTTTAACAGATTAGTGCGTGATAATTTGATCAGGGAAAAGGAGAGGCTTGAAAAGGCAGAGCAAACTTTCAAATCCCTTGATCTTAACAAGTTAAAGAGTTGCTTTGGGTTTGACACATTTTTTGCAACGGATGTTCGAAGATTCGGAGATGGAGGCATTTTCATTGGAAACTTGAGGAGACCCATTGATGAGGTCATTCCCAAGTTGGAGAAGAAGCTCTCTGATGCAGCGGGTCGGGAGGTTGTGGTATGGTTCATGGAAGAAAAAACAAATGACATTACCAAACAGGCTTGTGTGGTGCAACCCAAAGCAGAAATGGATCTCCAATTTGAGTCAACTAAGCTGAGTACTCCGTTTGGCTATCTCAGTGCAATTGCATTGTCCGTTACTACCTTTGGAACAGTTGCTCTGATGAGTGGCTTCTTCCTTAAGCCTGATGCTACATTTGATGATTATCTAGCTAATGTTGTGCCTCTATTTGGTGGGTTCTTATTTATTCTGGGAGTTTCTGAGATAGCCACAAGGGTAACAGCAGCTCGTTATGGTGTTAAACTCAGCCCTTCATTCCTGGTGCCATCTAATTGGACAGGATGCTTAGGAGTGATGAATAATTATGAATCCCTCCTCCCAAACAAGAAAGCTCTTTTTGATATTCCTGTAGCCCGTACTGCTAGTGCATATTTGACTTCACTAGTGCTTGCTGTTGCTGCATTTGTGGCTGATGGAAGCTTTAATGGGGGCGACAATGCATTGTACATACGGCCTCAGTTTTTCTATAACAACCCCTTGCTTTCTTTTATCCAATATGTTATTGGTCCTTACACCGATGATCTTGGAAATGTGTTGCCCTATGCTGTAGAAGGTGTTGGAGTTCCTGTTGATCCACTTGCATTTGCTGGTCTTTTAGGGATGGTGGTGACTTCTTTGAACTTGTTGCCATGTGGGAGACTAGAAGGAGGGCGCATTGCTCAAGCCATGTTTGGCAGAAGCACTGCTACGCTATTATCTTTTGCCACATCATTATTGCTTGGCATTGGTGGCCTCAGTGGTAGTATTCTGTGTTTGGCATGGGGATTGTTTGCAACCTTCTTCCGTGGTGGAGAAGAAATACCAGCAAAAGACGAGATCACCCCTCTTGGAGAAAGCAGATATGCTTGGGGTATTGTCCTTGGCCTTATCTGTTTCCTCACACTTTTCCCCAATGGTGGAGGGACATTCTCCAATTCATTCTTCAGTGCTCCATTTTTTAGGGGCGAATTGTAA 2298 0.4748 MNGGAAPPSGDASLVVKRRRSPQKVPVNGVKVTDQPSCGGAMAKNSVHCSDASFMKWTFADVVHVATHHWIPCLFALGLLFFMAVEYTLLMVPSSSPPFDLGFLATRSLHRVLESSPQLNTLLAALNTVFVGMQTSYILWTWLIEGRPRATISALFMFTCRGILGYSTQLPLPQGFLGSGVDFPVGNVSFFLFFSGHVAGSMIASLDMRRMQRWELAWTFDALNVLQAVRLLGTRGHYTIDLAVGVGAGILFDSLADEIESSSTTVSVAPEKPRSSESDHGRTRDEDSESEKQQQEMDWKTDEEFKKFMGNPSIEAAIKLEKKRADRKLKELDRESTTNNPILSLFNRLVRDNLIREKERLEKAEQTFKSLDLNKLKSCFGFDTFFATDVRRFGDGGIFIGNLRRPIDEVIPKLEKKLSDAAGREVVVWFMEEKTNDITKQACVVQPKAEMDLQFESTKLSTPFGYLSAIALSVTTFGTVALMSGFFLKPDATFDDYLANVVPLFGGFLFILGVSEIATRVTAARYGVKLSPSFLVPSNWTGCLGVMNNYESLLPNKKALFDIPVARTASAYLTSLVLAVAAFVADGSFNGGDNALYIRPQFFYNNPLLSFIQYVIGPYTDDLGNVLPYAVEGVGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQAMFGRSTATLLSFATSLLLGIGGLSGSILCLAWGLFATFFRGGEEIPAKDEITPLGESRYAWGIVLGLICFLTLFPNGGGTFSNSFFSAPFFRGEL. 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12021 765 Coils Coil 347 374 - -
Seca4g12021 765 Coils Coil 315 335 - -
Seca4g12021 765 PANTHER ZINC METALLOPROTEASE EGY1 270 755 IPR044838 -
Seca4g12021 765 MobiDBLite consensus disorder prediction 273 299 - -
Seca4g12021 765 MobiDBLite consensus disorder prediction 263 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12021 Seca-Chr4 261041630 261052367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12021 K25380 - gmx:100818502 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g12021 4 261041630 261052367 Seca4g12021 4 261041630 261052367 ECH