Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12015 ATGAAGAATGAGTTGGTTGTGCAAGATGGGTATGTGTTCAAACAAGAGACTCACCTCACAGTTCTCAAAACCTCTCTGTTTTTCGCCGGCGATGGCTTCGCTGTGTACGATTGCAAGGGCCAACTCGTCTTCCGCTTCGACTCCTACGGACCCCACACTCGCGACAAGGATGAGCTTGTTCTCATGGATCCCCAGGGCCGTTCTCTTCTCACCCTTCGCCGAAAGAAACCGAGTCTTCATCAACGGTGGGAAGGGTTCAAAGGGGAGAGGACGGACGGTGATAAGCCAATGTTCAGCGTGAAGAGATCGTCGATAATCGGACGGTCAAGGACGAGCGTCACGGTGGAGGTGTACGATAAGCCAGGTGTGGAGTATCTCATCGAAGGGTGCTTCCCGCAGCGTTGCTGCAAGGTTTTCAACTCCGCCAAGAAATTAGTGGCTGAGATTCGTCGCAAAGTGGACCCCACCACTAGCGTTATGCTTGGGAAGGAAGTGTTCATGCTATGCGTTCAGCCTGGTTTTGATGGGGCCTTCGCCATGGGATTGGTCTTGGTACTTGATCAGATCAACGGTGAGAATTACTTTGATAGCAGAACCACGGAGCCTGCAGTGCACCCTGCTACAGAAGATTCAGGACTTGCATCTTCGGTTCCATTTTGA 660 0.5182 MKNELVVQDGYVFKQETHLTVLKTSLFFAGDGFAVYDCKGQLVFRFDSYGPHTRDKDELVLMDPQGRSLLTLRRKKPSLHQRWEGFKGERTDGDKPMFSVKRSSIIGRSRTSVTVEVYDKPGVEYLIEGCFPQRCCKVFNSAKKLVAEIRRKVDPTTSVMLGKEVFMLCVQPGFDGAFAMGLVLVLDQINGENYFDSRTTEPAVHPATEDSGLASSVPF. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12015 219 Gene3D - 4 194 IPR038595 -
Seca4g12015 219 SUPERFAMILY Tubby C-terminal domain-like 5 190 IPR025659 -
Seca4g12015 219 PANTHER - 17 190 IPR007612 -
Seca4g12015 219 Pfam LURP-one-related 6 185 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12015 Seca-Chr4 260984074 260985221 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12015 - - gmx:100783735 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g12015 4 260984074 260985221 Seca4g12015 4 260984074 260985221 ECH
Seca4g12015 4 260984074 260985221 Seca4g08434 4 201390301 201392471 PCT