Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11957 ATGAAGGTTCAATTTTCAGCTATTGCACTTTGGTTTGTTTGTGACCTATTGGTCGTTGTTCTCGCAAATCCACATTACCCTGAGGGAATGTACCGATTTGATAGGGACTCTCATGTAACCTATAGTTATAAGTATGATAGAATTGGTGAAGTTCAGAAACAATGTGCCTCTGTCTTATCTGCTTCATCTGAATTGAGATCTGAATATAGTGGGATTACTGGTATGAAAGGAGAGCTTTCTTTTGTGAATGGGGATTGGAGGCAGGATGGAGGTAGGTTTCCCATAATGCCATTTGATGCTGACAAATCTCCAGGGACTTTGTCTGAGGACCGTACTCCATTGAATTTGGTCTCTTTTTGGGTAACAGATGTTGATCATGCCCATCGAATGAAGAAGTTAGTCCCTGTCAATGGTTTCATGCTGATGGGAATTACTAGAGATGGTAATTTTGTGGGAAATGCATATGATGGGAATCCTGACTTTAAGTTATGGCCCAGCCATTCTCAGCTTTCAATTCCTTTTCAAGGGGTTTACACTGAATCAAAGAAAAATGGTGGGGAAAGGGTGTTGTGTTTGTTAGGGAACACTATGCTTCCAACTCGAGAGGCTGATCCTGCCAATCCATGGGAATGGATGAAGAATCCTGGTGAGATACCTCTTTCAGAGGATGATCAAATTCTGCTAGTTCTTCACTATCCCTTGACATTCACATTAACAAACAGGATAATAAGCGGAGAGTTAAGAAGTTTGAACCGTGAATCAAATTCTAAATACTTTGATGTGGTTCACATATCATCGCAGTTGGGCAAGTCAGCAAAGTACTCATTTGGCTCACAACATGTTGTATCCAAAGCATGCAATCCTTACCCATACAAAGATAACTTCACAAATGATGTCATTAGTGTCTACAAGGGGGCAAGGTTTTGTGAAATCCTTGAAGAAATTACTAGAGAAAAACCTTTATCTGTTGTGCCAAACTGGAGATGCAATGGCACAGATAATTTCTGCAGTAAATTAGGTCCTTTTTTGTCAGATGAGGAAATCAAATCAACAGATGGGGGGTTTCAAGATGTTAAACTTTATATGCATGATGTTATTTGTGAGCAAGCAGCTAGTAATGGTAATGGTGGTTCTGCTAGGGTATCTACAGTTTTTAGAGCAGTTTCTCCATCAGAGAATCAGTATACTGCAGCAAAGAGAACTGGGCCCAACAACATGTCGCTTGCCACCGAAGGGATCTGGAAGCCTTCTAGTGGGCAGCTTTGCATGGTTGGTTGCCTTGGATTTATTGATGCCAAAGAGAGTAACTGCAACACTCGGATTTGTTTGTATATACCCACCACTTTTTCCATAAAGCAACGTAGTATCATTTTGGGAACTTTATCTCCTATTAACAACAGCAGTGCTTTCTTTCCTTTGTCCTTTGAGCAGCTTGTGATACCTACAGAGCTCTGGAATTATTTCAGGTTCACTCATCCAAATTACAGTTACTCTAAAATTGATTTGGCTGGCATTGTCCTGGAAAAAAATGAGCCCTTCAGTTTTACAACTGTCATTAAGAAATCATTGCTAACATTCCCCAAACTTGAAGATAATGAGTCATTCCAAGATAGTCTGTCCCTCCTTTCAGAAGATCTCACTTTTCATGTCTCAGGTTTTCCTGATCCTATGCCCAATGTCATGGCCCCAAGAGTTGACATTCAGATGGAGATTCTCTCCGTTGGTCCCTTGTTTGGGCGCTATTGGTATGCTCAAAATGGTACAACAGGGGAACAGGAAACACCATATCATGCAAATGCTGCTGAATATACAGAAAAGCAGCTTCTCATAAATGTATCTGCACAACTCAGTCTTACTGGAAAAGGTTTTGGTAATTTTTCTGTACTTTTTCTGGAGGGTCTTTATGATCCACACGTTGGAAAGATGTATCTAATTGGTTGCAGAGATGTGCGAGCATCATGGAAGGTCTTGTATCAGAGCTATGATCTTGAGGCTGGAATGGACTGTCTGATTGAGGTGGTTGTGTCTTATCCTCCAACTACAACTCGGTGGCTAGTCAATCCCACGGCTACAATTTCTATAGAAAGTCAAAGGACCGATGATGATGCCCTTCGGTTTAATTCAATAAAGCTCCAAACTTTTCCAATTATATACAGGAAGCAGCGTGAGGATGTCCTCTCACACAGAGGTGTTGAAGGGATTCTCCGAATCTTGACACTTTCATTGGCGGTTGGGTGCATTTTAAGCCAACTGTTTTATATAAAGCATAATGTGGATTCTCTTCCATATATATCTGTTGTTATGTTAGGTGTTCAAGCTCTCGGGTATAGCATTCCTCTAGTCACAGGTGCAGAAGCTCTTTTCAAGAGAATGGTTTCTGAATCTTATGTGTCATCTGGTGAACTGGAGAACAGTGAGTGGCTCCATGTCATTGACTACACAGTGAAACTGCTATTGATTGTATCATTGTTACTAACTCTGCGGCTTTCTCAGAAGGTGTGGAAGTCTCGCATCAGATTGCAAACACGCACTCCTCTTGAGCCACTTGGTGTCCCTAGTGACAAAAGGGTGTTTCTTTGTACCTTCACCATACATCTGATTGGGTATGTAATTGTTCTAATAATTCATGGCACAAAGACTAGTCAGAAGCTGCCTCTTAGAGCAAAGACATATATGATTGATAGAGAAAATTCTCATTCAATGCTGGGTTGGGCAACAGAATTGGAAGAATATTCAGGTCTTGTCCAAGACTTTTTCTTGTTTCCTCAAATTATTGGGAACTTAATCTGGCATATTGATTGTAAACCACTCAGAAAACTATATTTTATTGGAATCACTCTGGTCAGACTTCTTCCTCATATTTATGATTACATTAGAGCTCCAGTTCCAAATCCTTACTTTTCTGAGGACTCTGAATTTGTCAATCCAAGTTTGGATTTCTACTCAAAATTCGGGGATATTGCCATTCCTGTGATTGCAGTTATTCTTGCAATTGTGGTCTATATTCAACAAAGATGGAGCTATGAGAAACTGAGTCAGATTCTGACATTTGGGCAGTATAAGCTTCTCCCAACTTTCAGATATGAAAGGTTGCCTTCAAAGTCTTCTGAAACTGAACTAGTTCCCGGTGTCAATGGGGGTGCTGCAAATGAGAAAGAGCAAGTTGATGTAGAATGA 3177 0.4045 MKVQFSAIALWFVCDLLVVVLANPHYPEGMYRFDRDSHVTYSYKYDRIGEVQKQCASVLSASSELRSEYSGITGMKGELSFVNGDWRQDGGRFPIMPFDADKSPGTLSEDRTPLNLVSFWVTDVDHAHRMKKLVPVNGFMLMGITRDGNFVGNAYDGNPDFKLWPSHSQLSIPFQGVYTESKKNGGERVLCLLGNTMLPTREADPANPWEWMKNPGEIPLSEDDQILLVLHYPLTFTLTNRIISGELRSLNRESNSKYFDVVHISSQLGKSAKYSFGSQHVVSKACNPYPYKDNFTNDVISVYKGARFCEILEEITREKPLSVVPNWRCNGTDNFCSKLGPFLSDEEIKSTDGGFQDVKLYMHDVICEQAASNGNGGSARVSTVFRAVSPSENQYTAAKRTGPNNMSLATEGIWKPSSGQLCMVGCLGFIDAKESNCNTRICLYIPTTFSIKQRSIILGTLSPINNSSAFFPLSFEQLVIPTELWNYFRFTHPNYSYSKIDLAGIVLEKNEPFSFTTVIKKSLLTFPKLEDNESFQDSLSLLSEDLTFHVSGFPDPMPNVMAPRVDIQMEILSVGPLFGRYWYAQNGTTGEQETPYHANAAEYTEKQLLINVSAQLSLTGKGFGNFSVLFLEGLYDPHVGKMYLIGCRDVRASWKVLYQSYDLEAGMDCLIEVVVSYPPTTTRWLVNPTATISIESQRTDDDALRFNSIKLQTFPIIYRKQREDVLSHRGVEGILRILTLSLAVGCILSQLFYIKHNVDSLPYISVVMLGVQALGYSIPLVTGAEALFKRMVSESYVSSGELENSEWLHVIDYTVKLLLIVSLLLTLRLSQKVWKSRIRLQTRTPLEPLGVPSDKRVFLCTFTIHLIGYVIVLIIHGTKTSQKLPLRAKTYMIDRENSHSMLGWATELEEYSGLVQDFFLFPQIIGNLIWHIDCKPLRKLYFIGITLVRLLPHIYDYIRAPVPNPYFSEDSEFVNPSLDFYSKFGDIAIPVIAVILAIVVYIQQRWSYEKLSQILTFGQYKLLPTFRYERLPSKSSETELVPGVNGGAANEKEQVDVE. 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11957 1058 Pfam Protein of unknown function (DUF2921) 52 1012 IPR021319 -
Seca4g11957 1058 MobiDBLite consensus disorder prediction 1037 1058 - -
Seca4g11957 1058 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 49 1016 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11957 Seca-Chr4 260243443 260247679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11957 - - gmx:100794859 1800.79