Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11916 ATGCATCTTACAGTAGTAAGAGAGTTGAACCTCATGGGAGATCCACCCTCTTCATTGAATTACCCATCTGTGAAAATCCATGGTTTGCTAGTGCTTAATTTTTTCACAGGAAGAATCCAAGGTAGAGCAATCCGTCACATTAATGACTATGCAGCAATCTTGTTGGTTGACACAAGGTATGCATCTGATTCCTCAAAACGGAGCTTCAACCACCCAGTCACCAAGCTCCCCCAGTGGATAAAAGATCGCCTTGTTTCTTCTTCCAATAATTATGGCGAAGTACATAAGTTACTGCATCAGTTTTTCAAACTCAAAAAGACATGTTGCCATTAG 333 0.4084 MHLTVVRELNLMGDPPSSLNYPSVKIHGLLVLNFFTGRIQGRAIRHINDYAAILLVDTRYASDSSKRSFNHPVTKLPQWIKDRLVSSSNNYGEVHKLLHQFFKLKKTCCH. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11916 110 Gene3D - 38 97 IPR027417 -
Seca4g11916 110 Pfam Helicase C-terminal domain 41 71 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Seca4g11916 110 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 41 103 IPR045028 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11916 K11273 - gmx:106794132 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11916 4 259785934 259787357 Seca4g11916 4 259785934 259787357 ECH