Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11897 ATGAGCAGCTCATTTAAGGCTTTTCACAAACACCTCACTCTCCTTTCCTTTCATAAACGCTCTGCCTCTTATGGCTTTCTAGTTTCTTCTTCTCTCACTCTCTTACCCCATCCCAGATTCCCTTTCTCTGAATTTCGCCCGTACTCCTCATCCCCATCTACTACGTTTATGGAGGTCTTCAAAGCAATTGCTAAGAAAGAACTTGCAGCTTATGGCAATGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACACACAACTCGTCTCATCAGCACTGAATATATCTAATCTTTTGTGTGGAAGTGACATGAAAGTAATCATCTCCTGTGAACTGAAGAATAATGAAATGCTTAGTTTGTTGCTTGGCATTCTTGCTTATGGGATGGGAGTGCTGTATTACATTCATGGAAATCTTGGGGGAGCTCGAGTAGGAATTGTGGCCAAGCCCTCTGCTGAATTTGTTGCTGGAATACTTGGGACTTGGATTAGTGGAGGTGTTGCTGTTCCACTTGCACTGAGCTATCCTGAAGCAGAGCTCTTGCATGTGATCAATAATTCAGATGTGTCTGTGATTCTGAGTACTGAAGATCATAGTGAATTAATGCAAAGCATAGCCAATAAAACCTCTTCTCAGTTATTTCATCTTCCACTTGTTCCCAATAAGTCTTCAGAGCAAAGCACAGACGAACATTCACAGAGTGGGGAAATTGATGCTGACGGAATTTCCATGGAAAATATTGGAAGATCAAGTGAAGATCCAGCACTGATTTTATACACTAGCGGAACAACAGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTGCACAGGTGCAAAGCTTGACAAAAGCGTGGGAGTACTCATCTGCTGATAAATTTCTGCATTGTCTACCACTACATCATATCCATGAAAGTTTTTGTGTTACATTATTCAATATTTTTGTAATTTGTAATTAG 966 0.4048 MSSSFKAFHKHLTLLSFHKRSASYGFLVSSSLTLLPHPRFPFSEFRPYSSSPSTTFMEVFKAIAKKELAAYGNVAIRADQKSYSYTQLVSSALNISNLLCGSDMKVIISCELKNNEMLSLLLGILAYGMGVLYYIHGNLGGARVGIVAKPSAEFVAGILGTWISGGVAVPLALSYPEAELLHVINNSDVSVILSTEDHSELMQSIANKTSSQLFHLPLVPNKSSEQSTDEHSQSGEIDADGISMENIGRSSEDPALILYTSGTTGKPKGVVHTHRSIIAQVQSLTKAWEYSSADKFLHCLPLHHIHESFCVTLFNIFVICN. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11897 321 Gene3D - 135 320 IPR042099 -
Seca4g11897 321 PANTHER ACYL-COA SYNTHETASE 77 313 - -
Seca4g11897 321 ProSitePatterns Putative AMP-binding domain signature. 257 268 IPR020845 -
Seca4g11897 321 Pfam AMP-binding enzyme 140 312 IPR000873 -
Seca4g11897 321 PRINTS AMP-binding signature 252 263 IPR020459 -
Seca4g11897 321 PRINTS AMP-binding signature 264 272 IPR020459 -
Seca4g11897 321 MobiDBLite consensus disorder prediction 221 242 - -
Seca4g11897 321 SUPERFAMILY Acetyl-CoA synthetase-like 12 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11897 Seca-Chr4 259639222 259643143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11897 125 307 Acyl Lipid Metabolism Gene Families AT4G14070 30.693 6.12e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11897 K18660 - gmx:100813324 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11897 4 259639222 259643143 Seca4g11897 4 259639222 259643143 ECH