Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11888 ATGGACAAAATTGTAGCCCTTAAAGCTTGCTCCACTTTTGTGAGATCGCCCTCTTCACCTGCACACTTCAACCTCCAACCACCTCCATTTCTCAACCTGAATACGCCCAATTTCGGTTATTGGTGCAGTCGAATCATACATAATAAGCGACCCAATTGGCCAAAGTCTTTGTCACTGCGCTCAAAATCCGGGCTTGGTGGAGTTGACCCTTTGGAAATGGCAGAGGATTGGAATCGCACCGCCCTTCTTGTAATCGACATGCAGAAAGATTTCATAGAAGATAGGGGTCCTATGCTGGTAAAAGGAGGGAAAGACATTGCCCCAAATGTGATTAAGGCTGTGGAAGTTGCCAGGCAGCGTGGAATTCTCATAGTTTGGGTAGTACGGGAACACGATCCCTTAGGAAGAGATGTTGAACTCTTTCGCAGGCATCTATACACAGCAGGGAAAGTTGGTCCAACCTCTAAAGGAAGTGAAGGTGCAGAATTAGTTGATGGACTGGTAATTAGAGAAGGAGATTATAAACTTGTGAAGACCAGGTTTAGTGCATTCTTTTCTACACACCTTCATTCAGTTCTTCAAGGAGCAGGAATTAATAGCCTGGTGGTCACTGGTGTTCAAACTCCAAACTGTATCAGGCAAACTGTCTATGATGCTGTAGCATTGGACTATCAACCTGTAACTGTCATTGTTGATGCCACAGCAGCGGCCACTCCTGATATTCATCTTGCCAATGTGTTTGACATGAAAAATATTGGAGTTGCAACCCCAACATTACAAGAATGGAGCGAATACAAACCTTGA 804 0.4453 MDKIVALKACSTFVRSPSSPAHFNLQPPPFLNLNTPNFGYWCSRIIHNKRPNWPKSLSLRSKSGLGGVDPLEMAEDWNRTALLVIDMQKDFIEDRGPMLVKGGKDIAPNVIKAVEVARQRGILIVWVVREHDPLGRDVELFRRHLYTAGKVGPTSKGSEGAELVDGLVIREGDYKLVKTRFSAFFSTHLHSVLQGAGINSLVVTGVQTPNCIRQTVYDAVALDYQPVTVIVDATAAATPDIHLANVFDMKNIGVATPTLQEWSEYKP. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11888 267 Gene3D - 71 266 IPR036380 -
Seca4g11888 267 PANTHER OS02G0276400 PROTEIN 72 264 - -
Seca4g11888 267 SUPERFAMILY Isochorismatase-like hydrolases 74 264 IPR036380 -
Seca4g11888 267 Pfam Isochorismatase family 80 255 IPR000868 -
Seca4g11888 267 CDD cysteine_hydrolases 81 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11888 Seca-Chr4 259577216 259579908 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11888 - - gmx:100527482 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11888 4 259577216 259579908 Seca4g11888 4 259577216 259579908 ECH