Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11882 ATGTTGTGTTTTCTTTTCTCTTCTCACCTTTCCTCTTTTCATGGCTACCCTTTTGAATCTGCAACATCAACTATTCACCTATTCGTTTATGCATCCCATGTTTCTTCCAACAACAGATCCTTGGGGTTAGATATCAGAAAAAAGACAACGGCCTATGCCCTCTTACATACCAGTTCAAAAGCAATAGAGGAAAGAAACAATAGCTCTTTGATTAATGGCCTGTTAGTTGGATCTTTGTCTAGATGCTACACGTCCTTAAGGAGGTGCTCATCATTGGCAGCATCAACTAAACCTCATTTTTCATGTACTGATCAAAATGAGGAAGATGAGGTTACAAATTTTACATCCACTAGTCAGGGAATGGAATTTAATAGGGTGAATTGTGTTGTGTGGGCATTGCATGAATCTGCTAGGAGTTTTTCCCAAGCAGTTGAGTCACTTGGACTAGCAAGGAGTGGTCCAGGTCTTGTAATGGCATGGATTGGAAAGGATGTGCATCAGTGGCATAGAAGTATTGCTTATCAGGTTGCAGTTTATGCTTTAATGAAAACAGCAATTGATTTGGAGATATTGCTTTCACATGAACGCCAGAATGAAATTTCCCCTGTTAGAAAGATATCTGAGTTGCTTTTCCTCCCTTGTTTCAGTTTGACCCCATTACTAAATCAGATGGGAGAACACATTGAAATTCGACTGAAAATGAGGCATCCATATTTGGTGCAGTGGTTTAGAGACACCGAATTGCCACAAATAGCAGGATATTTTATTCCACTTCTAAAAAAGTGGTCCATGGAATATGCAGGAAGTGCAGTGGTGAAATTGGGCTCTGGGCGCATCTGCTGCCCCTTAATTGTATTGTCTCTTGAAGATGTTTTGGTCAAGCTCATGGATTTTTCACTCAATCTTGCATCTGTGGACAAGTTACACCAGCTAGCAACTGAGGCAGGATTTGAACGGGATTTCTTGTACCATTTTGGAGGGAAGGTTCTTCCCAGTGAAAAAACTGAGGACCTAGAGTTTTGGATTGGTTTGGCCCATAAGAAACTATTGAAAGCTTTCTGTGAAAAAGGCATCATTTTAAACAAACAAAATTTTCAGCACAAGATTCAATCAGAAAGTTTGGCCACATTGGGACTTTTTGCATATCTTGGAAGAAGGACTAGAATATTTTTGTCAGCAATGGGCATTAAGGATCTTGATGAAATGGTTAAGGACTTCCTCAGTTACTTGGAATGTGGCATTCTTTTCATTTATCCAGAATTTTCCTCCATCCCAGTGTATCAGCTTTTCATGGAGGTAGTAACTGATGAGATTGGATGGCTTGATTTTTATGCTTCACATGTTCAAATAAACTGCCGGGAGAAAGGGTCCAAACATCATGCTCGCCAGGCAGAGAAAGAGATAATTTCTTCGGCAGTTTTTACTGTGTGCTATGATGTTTTCTCTGGGTTTGCGCACTTTAATCGCTCAACTCAACAATCATTGGACACAGCTTCCATGTCATACCTGCTTCGCTGTCAGGGGTTGCTAAGTATTTGTCTGCAAGATCACTGGGCTGCTTATGACAAATCAGGTGAATCACTAAATATTGTGGATCATGCTGGATTTGACAACCACACATCATATATAGGAAGTATAAATGGACCCAAATTACCTTTGGTGTTTGAAGTGCAACAGAAGTCACATTTGACTACAGAAGGATGTCCAAAAAGTAATTCTCAGAACAGTTCTATATTAGAAGAGGCTCCAATCTCAGCAACCTCAAACAAGAAAACACATGGGAAAGGTTGCTGCATTGATAAGTCAAATCCTCTACGTGAAAGTTTTATCAAGAGACACAGCATTAAGTTGGCCTCCACGAGTGCAAACCTCTGGATGGGTACTCTGTTGCTCTTCATAGACATCATGGTTGCTTTAGAGCTACTTGTAAGACAAGCACATGGCTGCAAGGCTTCAAGGAGTCAAAAAAAGAGGCTAGAAAGAACCATGACTGACATAATTGTGCTAATTCCAGTGACAATTTTGATGCTACTTCCGGTGAGCACCTTAATCCTCTACTTCTATTTGATTTTTGGTTAG 2079 0.4021 MLCFLFSSHLSSFHGYPFESATSTIHLFVYASHVSSNNRSLGLDIRKKTTAYALLHTSSKAIEERNNSSLINGLLVGSLSRCYTSLRRCSSLAASTKPHFSCTDQNEEDEVTNFTSTSQGMEFNRVNCVVWALHESARSFSQAVESLGLARSGPGLVMAWIGKDVHQWHRSIAYQVAVYALMKTAIDLEILLSHERQNEISPVRKISELLFLPCFSLTPLLNQMGEHIEIRLKMRHPYLVQWFRDTELPQIAGYFIPLLKKWSMEYAGSAVVKLGSGRICCPLIVLSLEDVLVKLMDFSLNLASVDKLHQLATEAGFERDFLYHFGGKVLPSEKTEDLEFWIGLAHKKLLKAFCEKGIILNKQNFQHKIQSESLATLGLFAYLGRRTRIFLSAMGIKDLDEMVKDFLSYLECGILFIYPEFSSIPVYQLFMEVVTDEIGWLDFYASHVQINCREKGSKHHARQAEKEIISSAVFTVCYDVFSGFAHFNRSTQQSLDTASMSYLLRCQGLLSICLQDHWAAYDKSGESLNIVDHAGFDNHTSYIGSINGPKLPLVFEVQQKSHLTTEGCPKSNSQNSSILEEAPISATSNKKTHGKGCCIDKSNPLRESFIKRHSIKLASTSANLWMGTLLLFIDIMVALELLVRQAHGCKASRSQKKRLERTMTDIIVLIPVTILMLLPVSTLILYFYLIFG. 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11882 692 PANTHER LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN 103 680 IPR044202 GO:0005743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11882 Seca-Chr4 259507794 259512699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11882 619 689 EF-hand Containing Proteins AT3G59820 35.211 2.56e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11882 - - gmx:102668384 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11882 4 259507794 259512699 Seca4g11882 4 259507794 259512699 ECH