Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11875 ATGGTGAGTGAGCAGAGAGCACCAGAGGAGACAAAGGTGGCTGCTTTGGAGAACAGTGGCACAATGAGTGGACCCCTCGTCGGAGCCGCCGCGGGGATCCGCCGGCGCCGGAGGATGGAGGCGATGCAGTTGATTTTGAGGGCTATGTGCATGGCCAGTTCTGTAGTTGCTCTGTCACTCATGGTCACAGCCAAGCAAAATAGCTCAGTCAACATCTATGGCTTTTCCTTGCCTATTCACTCCAAGTGGTCTTTCTCTGAATCTTACGAGTTTCTTGTTGGGGTTTCTGCGGCTGTTGCAGCTCACTCCATGTTGCAACTATTCATTGGCACATCAAGATTTCTTAGGATGTCTTCTGTGATTCCTTCTAGGAATCATGCATGGATTATTTTTGCTGGGGACCAGGCATTTGCATATGCATTGATGAGTGCTGGATCTGCTGCATCAGGGGTGACCAATCTGAATCGCACAGGAATTAGACATACAGCTCTGCCAAATTTTTGCAAGCCTTTGCACAAGTTTTGTGACCATGTTGCCATCTCAATAGCCTTCACTTTCATCAGCTGTTTTTTGCTGGCCACATCTGCTGTGCAAGATGTGATATGGCTCTCCCAACACTGA 621 0.4879 MVSEQRAPEETKVAALENSGTMSGPLVGAAAGIRRRRRMEAMQLILRAMCMASSVVALSLMVTAKQNSSVNIYGFSLPIHSKWSFSESYEFLVGVSAAVAAHSMLQLFIGTSRFLRMSSVIPSRNHAWIIFAGDQAFAYALMSAGSAASGVTNLNRTGIRHTALPNFCKPLHKFCDHVAISIAFTFISCFLLATSAVQDVIWLSQH. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11875 206 PANTHER CASP-LIKE PROTEIN 4A4 29 201 - -
Seca4g11875 206 NCBIfam plant integral membrane protein TIGR01569 44 194 IPR006459 -
Seca4g11875 206 Pfam Casparian strip membrane protein domain 37 191 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11875 Seca-Chr4 259414774 259416879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11875 37 206 Miscellaneous Gene Families AT3G16300 51.765 5.41e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11875 - - gmx:100783028 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11875 4 259414774 259416879 Seca4g11875 4 259414774 259416879 ECH