Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11871 ATGGCACCCCATGGAGAGTCTCTGTCTAGCTCATTCTCAAGGAGCAACAACATATCAAAGCTCTCATCTGAGAACCTTCAAAGAACAGTCTCAGACATCTCATTTGAGCTAGCCAAAGAAGGGATCAATGATCTGAAACTACCACCAATATCTGAGGTGGAAGATGCAAAGTGTGAGTGTTGTGGGATGTCTGAGGAGTGCACACCAGAGTACATAGACCGTGTGCGTGACAAGTTCCAAGGGAAGTGGGTGTGTGGGTTGTGTGCAGAGGCAGTGAAGGAAGAGATAGAGAAAAATGGAGGGAAAAAGGAAGAGGCTTTAAGTGCACACATGAGTGCATGTGTTAGGTTCAACAAATATGGGAGGGCTTTCCCTGTTCTGTTTCAAGCAGAGGCAATGAAAGAGATGTTGAAAAAGAACAAACTTGATGGGAGAATGAGGGCTAAGTCTATTAGTCCAAGGGACAAAGGAGGACAAAAGAAAGGAGCAGGGATTGCTCGAAGTTCAAGTTGCATTCCAGCAATTACAAGAGAGATGAATGATATCAAAATTACCAATTAA 561 0.4385 MAPHGESLSSSFSRSNNISKLSSENLQRTVSDISFELAKEGINDLKLPPISEVEDAKCECCGMSEECTPEYIDRVRDKFQGKWVCGLCAEAVKEEIEKNGGKKEEALSAHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKLDGRMRAKSISPRDKGGQKKGAGIARSSSCIPAITREMNDIKITN. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11871 186 Pfam Protein of unknown function (DUF1677) 53 139 IPR012876 -
Seca4g11871 186 PANTHER OS01G0745000 PROTEIN 49 180 IPR012876 -
Seca4g11871 186 MobiDBLite consensus disorder prediction 144 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11871 Seca-Chr4 259365629 259366189 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11871 - - gmx:100816162 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11871 4 259365629 259366189 Seca4g11871 4 259365629 259366189 ECH
Seca4g11871 4 259365629 259366189 Seca4g08696 4 206928040 206928609 PCT