Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11864 ATGGATGAGTTAACCGAGTCTCCATTCCCTAAGCTCTCCATGGACGAGATGCTGGAATTGGAAAGAATATACATGGATATGGGGGAAAAATCACTCAATCAGAATTTATGCCAGGAGATTGCTACAAATTTTAGTTCCTCATCGAACAGGAAGGGTAAAACTTCCTTATCATGGAAACAGGTGCAGCAGTGGTTCCAAAATAAACATAAAGAGTCACAGGGTCAAGTAACTTCATCACCTGATGGGGTGACAATATTTGTTGATCTTTCAGATATATCCAATTTAAAAAATGGATATAAAAGCTCTCCAAGCCCAAAAGGTGAACAAGTTGCAGATCTCAACGAATTGGGATTTGAGGCAAGATCTTCAAAAGACTGTGCATGGCACGATGTTGCAATGTTTCTTAACTATAGAGTTCTGAGCACAGGCGAACTTGAAGCCCGTGTTCGATATGCTGGATTTAGTAAGGAGGAGGACGAGTGGGTGAATGTGAAAGAGGGTGTGCGAGAGAGATCCCTCCCATTGGAGGCTTCAGAGTGTCACAAGGTGAAGCATGGAGATCTTGTACTATGTTTCCAGGAAAGAGATGATTATGCCCTCTATTGTGATGCTCGTGTTGTAAACATCCAGAGGAGGGCACATGATAAAACAGAGTGTAGGTGCATCTTCATTGTCCGGTTTCTCCATGACAACTCTGAGGAAGGAGTTTGTTCGAACCACTTATGCTGTAGGCCTACACAAGAGGAACCTGCTGTCTTCGTAAATCCTATCCCAACTCCCACCCTAAATCCCATAGAGGATTTGTGGGGATGA 813 0.433 MDELTESPFPKLSMDEMLELERIYMDMGEKSLNQNLCQEIATNFSSSSNRKGKTSLSWKQVQQWFQNKHKESQGQVTSSPDGVTIFVDLSDISNLKNGYKSSPSPKGEQVADLNELGFEARSSKDCAWHDVAMFLNYRVLSTGELEARVRYAGFSKEEDEWVNVKEGVRERSLPLEASECHKVKHGDLVLCFQERDDYALYCDARVVNIQRRAHDKTECRCIFIVRFLHDNSEEGVCSNHLCCRPTQEEPAVFVNPIPTPTLNPIEDLWG. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11864 270 Gene3D - 114 174 - -
Seca4g11864 270 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 248 IPR039276 -
Seca4g11864 270 Pfam SAWADEE domain 115 242 IPR032001 GO:0003682
Seca4g11864 270 Gene3D - 175 247 - -
Seca4g11864 270 SUPERFAMILY Homeodomain-like 16 72 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11864 Seca-Chr4 259291256 259297799 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11864 - - gmx:100800332 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11864 4 259291256 259297799 Seca4g11864 4 259291256 259297799 ECH