LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g11848	ATGGGGAAGGTGGTGGTGAGTGCGACGGTGATTGGGGCAGCGACGGTGTGCGCGGTGGGTGCGGTGGTGGTACATCGGTACGTGAAGAAATCTGGACGATGGGGAAGAGCAATGGCGATATTGAAGGAGTTGGAGGAGAAGTGCGCTACGCCGACGTGGAAGCTGAAGCAGGTTGCGGATGCCATGACGGTGGAGATGCATGCTGGTCTTGCTTCTGAAGGTGGTAGTAAGCTCAAGATGCTCATCACTTTCGTTGATAATCTCCCAACCGGGAATGAGGAAGGAGTATTTTATGCATTGGACCTTGGAGGGACCAACTTTCGTGTATTACGCGTGCAACTGGGAGGCAAGGATGGTGGTATTATTAGTCAAGAATTTAATGAGGTGTCAATTCCTCCTAATTTGATGGTTGGGACTTCAAAAGAACTCTTTGACTATATTGCAGCAGAACTTGCAAATTTTGTAGCCAAAGAAAATCAAGATTTTCAAGTTCCTCCTGGTAGACAGAGAGAGCTAGGTTTCACCTTTTCCTTTCCTGTCATGCAAACATCAATTGCTTCTGGGAACCTTATCAAGTGGACAAAAGGCTTCAACATAGATAATACAGTTAATCCAGAATCATCATTGTTTTGA	633	0.4629	MGKVVVSATVIGAATVCAVGAVVVHRYVKKSGRWGRAMAILKELEEKCATPTWKLKQVADAMTVEMHAGLASEGGSKLKMLITFVDNLPTGNEEGVFYALDLGGTNFRVLRVQLGGKDGGIISQEFNEVSIPPNLMVGTSKELFDYIAAELANFVAKENQDFQVPPGRQRELGFTFSFPVMQTSIASGNLIKWTKGFNIDNTVNPESSLF.	211

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g11848	210	FunFam	Phosphotransferase	83	208	-	-
	Seca4g11848	210	Pfam	Hexokinase	41	204	IPR022672	GO:0005524\|GO:0005975\|GO:0016773
	Seca4g11848	210	PANTHER	HEXOKINASE	14	203	IPR001312	GO:0001678\|GO:0004396\|GO:0005524\|GO:0005536\|GO:0005975
	Seca4g11848	210	Gene3D	-	23	86	-	-
	Seca4g11848	210	SUPERFAMILY	Actin-like ATPase domain	26	204	IPR043129	-
	Seca4g11848	210	PRINTS	Hexokinase family signature	98	114	-	-
	Seca4g11848	210	PRINTS	Hexokinase family signature	172	197	-	-
	Seca4g11848	210	ProSiteProfiles	Hexokinase domain profile.	35	210	IPR001312	GO:0001678\|GO:0004396\|GO:0005524\|GO:0005536\|GO:0005975
	Seca4g11848	210	Gene3D	-	87	208	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g11848	Seca-Chr4	259161598	259163627	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca4g11848	K00844		-	gmx:100783775	325.479

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca4g11848	4	259161598	259163627	Seca4g11848	4	259161598	259163627	ECH