Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11844 ATGGGAATGAAGTTACTTGTTTTGTTTGTTGCTACCATGTTAGCAACATGCCATGGCTCAGACCATGGTGCAAACTTCCAAATTTTCCCTCTCCGAATGAAAACTGGCTTAGGTGGCCACTACATTCCTGATGTATCTTGTGCAAGTTGGAGGCTTGCTGTGGAAGCACACAACATCATTAACTTCAAAACCGTTCCAGAAGAATGCTCAGGATATATTGGCAACTATATCTTGGGCGATCAATATAGATCTGACTCCAAAACTGTTTGTAAGCAAGCTTACTTTTATGCCAGGGAACTCGATATCACTAGCAAAGACGTTTTTGTTTTTGACGTTGATGAGACTTCACTCTCTAATCTCCCATATTATGCTGAGAACGGCTTTGGGGTGGAACCATATAATTCGACGAAGTTTAATGCATGGGTTGAGCTTGGAACAGCACCAGCACTGCCTGAGTCTCTGAAACTGTACAACAAACTTTTGGGTCTTGGCATCAAGGTTGTATTCTTGACAGGAAGAACCGATGATCAAAGGAAAATAACAGCTAAGAACTTAAAGAATACTGGCTTCTACACATGGACAAAGTTAATCACTAAGAATTCAACGGAATATTCTGGGCAAACGGCAGTTACATACAAATCAGCTGAGAGGAAGAAGCTGGTGGAAGCAGGATACAGAATCATTGGAAACATTGGAGACCAATGGAGCGATATCCTCGGAACCAACATAGGCGATAGGACTTTTAAGCTCCCTGATCCTTTGTATTACATTAGTTGA 777 0.4157 MGMKLLVLFVATMLATCHGSDHGANFQIFPLRMKTGLGGHYIPDVSCASWRLAVEAHNIINFKTVPEECSGYIGNYILGDQYRSDSKTVCKQAYFYARELDITSKDVFVFDVDETSLSNLPYYAENGFGVEPYNSTKFNAWVELGTAPALPESLKLYNKLLGLGIKVVFLTGRTDDQRKITAKNLKNTGFYTWTKLITKNSTEYSGQTAVTYKSAERKKLVEAGYRIIGNIGDQWSDILGTNIGDRTFKLPDPLYYIS. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11844 258 PIRSF VSP 1 258 IPR014403 -
Seca4g11844 258 NCBIfam plant acid phosphatase 45 257 IPR010028 GO:0003993
Seca4g11844 258 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 5 257 - -
Seca4g11844 258 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 39 257 IPR005519 -
Seca4g11844 258 CDD HAD_VSP 75 257 - -
Seca4g11844 258 Gene3D - 43 258 IPR023214 -
Seca4g11844 258 SUPERFAMILY HAD-like 103 241 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11844 Seca-Chr4 259104362 259105589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11844 - - gmx:547669 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11844 4 259104362 259105589 Seca4g11844 4 259104362 259105589 ECH