Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11833 ATGAGAGAGGAGTATGGAAAATTGAACAGGGTAGAGATGAGCATATGGGAATGTTGTGAACTCCTTAATGAAGTGGTGGATGAGAGTGACCCTGACTTGGATGAACCTCAGATTGAGCACTTGCTCCAAACTGCTGAAGCTATAAGGAAGGACTACCCAAATGAAGATTGGCTCCACTTAACCGGCCTTATCCATGATCTTGGCAAGGTGCTTCTGCTTCCCAGTTTTGGAGGACTTCCTCAATGGGCTGTTGTAGGTGACACATTCCCAGTTGGTTGCAGATTTGACAAATCCATTGTTCATCACAGGTATTTTAAGGAAAATCCAGACTATAACAAATCTACATACAACACTAAATATGGGATTTACTCAGAGAAATGTGGACTTGATAATGTGATGATGTCATGGGGACACGATGACTACATGTATCTAGTGGCAAAGGAGAACAATACTACTCTGCCCTCAGCTGCTTTGTTCATTATCAGATACCATTCATTCTATGCCTTACACAGGGAAGGAGCCTATAAACACTTGATGAATGATGAGGATGTTGAGAATCTGAAATGGCTCCACATTTTCAAGTAA 585 0.4171 MREEYGKLNRVEMSIWECCELLNEVVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLLPSFGGLPQWAVVGDTFPVGCRFDKSIVHHRYFKENPDYNKSTYNTKYGIYSEKCGLDNVMMSWGHDDYMYLVAKENNTTLPSAALFIIRYHSFYALHREGAYKHLMNDEDVENLKWLHIFK. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11833 194 SUPERFAMILY HD-domain/PDEase-like 2 193 - -
Seca4g11833 194 Gene3D Hypothetical protein af1432 12 190 - -
Seca4g11833 194 Pfam Myo-inositol oxygenase 1 193 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Seca4g11833 194 PANTHER MYOINOSITOL OXYGENASE 1 194 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11833 Seca-Chr4 258931587 258934482 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11833 K00469 - gmx:100809388 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11833 4 258931587 258934482 Seca4g11833 4 258931587 258934482 ECH