Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11830 ATGGTCTCAACTCAGGTGAAGGTTCTGAGATCAATGAGACCACTACAGCTTGAAAATGTTGTTATTGGTCAATATAAGGGCCACAGCAAGGGTGGTAAATCATTTCCTGGTTATGCAAATGACCCAACTGTTCCAAAGGGTAGTCTTACTCCAACATTTGCAGCAGCAGCTCTTTTTATTGACAATGCAAGATGGGATGGGGTTCCTTTTCTCATGAAAGCTGGAAAGGCTCTCCATACTAAACGTGCAGAAATCAGAGTACAATTCAGACACGTCCCAGGTAACTTGTTCAAGCGGAATTTTGGAACTGATCTGGACAAGGCCACAAATGAGCTTGTGCTTCGTGTACAACCTGACGAAGCTATATATTTGAAGATCAACAACAAAGTTCCGGGTCTTGGAATGAGATTAGACAGAAGTGACCTCAATTTACTTTACAAAGCAAGGTATCCAAGAGAAATACCAGATGCATATGAGAGGTTACTCTTAGATGCTATTGAAGGTGAGCGGAGGTTGTTCATTAGAAGCGATGAGCTTGATGCAGCTTGGGCACTATTCACTCCTTTGCTAAAAGAAATTGAAAACAAGAAGGTTGCCCCTGAGCTCTATCCTTATGGTAGCAGAGGACCAGTTGGAGCACATTACCTTGCTGCAAGGCACAACGTAAGATGGGGAGATCTTGGTAACGAAGATTGA 696 0.4296 MVSTQVKVLRSMRPLQLENVVIGQYKGHSKGGKSFPGYANDPTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLFKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLYKARYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKKVAPELYPYGSRGPVGAHYLAARHNVRWGDLGNED. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11830 231 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 4 224 IPR022675 GO:0004345|GO:0006006|GO:0050661
Seca4g11830 231 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 5 224 IPR001282 GO:0006006|GO:0016614|GO:0050661
Seca4g11830 231 Gene3D Dihydrodipicolinate Reductase; domain 2 1 225 - -
Seca4g11830 231 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 4 224 - -
Seca4g11830 231 FunFam Glucose-6-phosphate 1-dehydrogenase 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11830 Seca-Chr4 258910057 258911683 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11830 K00036 - gmx:100780018 441.425