Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11811 ATGCAGTCTAGGTTGGAGGAAGGGAAGGACCCTGCTACTACGTTAAGAACTACTCCCTCTAGGCCTTTCCCTTTGAGACTTCTGCAGTTCTTCTTGGTCTTTTTGGTTCTTGGCCTAGGTGCTTCGTTTCTTAGCATGTACATGATTAGGCATTTTGGTATTCATAACGTGGCTCTGGTACAGTCTACGTTTAAGCCTTGCTTTGAGCAGCCAGCGACCAAAGAAAGTTGGATTAGGCCTCCATCCAATTTGCTGCATACCATGAGTGACACTGAACTCTTCTGGCGGGCTTCTTTTGTTCCAAGGATCAAGAATTATCCTTTTAAAAGAACTCCCAAGATTGCCTTCATGTTCTTGACCAAGGGACCCTTGCCAATGGCGCCACTCTGGGAGAGGTTCTTTAAAGGGCATGAGAGACTTTATTCCATCTATGTTCATTCACTGCCATCTTACACTGCTGATTTTTCACCATCATCGGTTTTTTATAAGAGACAGATCCCAAGCCAGGTGGCAGAATGGGGAATGATGAGTATGTGTGATGCTGAAAGAAGACTTCTGGCCAATGCATTGCTTGATATCTCAAATGAATGGTTTATCCTCCTATCTGAGGCCTGCATTCCTCTCCAAAACTTCAGCATTATATACCGATACATATCACGATCAAGGTATAGCTTTATGGGTGCATTTGATGAACCTGGTCCTTATGGGAGAGGACGTTATGATGAAAACATGGCACCTGAGATCAACATGAGTGACTGGCGCAAGGGATCTCAGTGGTTTGAAATCAATCGCGAACTTGCTGTTAGGATAGTTGAAGACAGTACTTACTATCCTAAACTCAAAGAATTCTGTAAACCACACAAATGCTATGTTGATGAGCACTATTTCCAGACAATGTTAACCATTAATGCTCCTCATCTCTTGGCAAATAGGAGCCTCACTTATGTGGACTGGTCAAGGGGTGGTGCTCACCCAGCTACCTTTGGGAAGGATGACATCAAAGAGGAATTCTTCAAGAAAATTTTGCAAGACCAGACATGTCTTTATAATAACCAGCCATCTTCCCTTTGTTTCTTATTTGCAAGAAAATTTTCACCTAATGCTTTGGGTCCTCTTTTAGATATAGCACCCAAAATTCTAGGAATATGA 1149 0.4265 MQSRLEEGKDPATTLRTTPSRPFPLRLLQFFLVFLVLGLGASFLSMYMIRHFGIHNVALVQSTFKPCFEQPATKESWIRPPSNLLHTMSDTELFWRASFVPRIKNYPFKRTPKIAFMFLTKGPLPMAPLWERFFKGHERLYSIYVHSLPSYTADFSPSSVFYKRQIPSQVAEWGMMSMCDAERRLLANALLDISNEWFILLSEACIPLQNFSIIYRYISRSRYSFMGAFDEPGPYGRGRYDENMAPEINMSDWRKGSQWFEINRELAVRIVEDSTYYPKLKEFCKPHKCYVDEHYFQTMLTINAPHLLANRSLTYVDWSRGGAHPATFGKDDIKEEFFKKILQDQTCLYNNQPSSLCFLFARKFSPNALGPLLDIAPKILGI. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11811 382 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 43 373 IPR044174 GO:0016757
Seca4g11811 382 Pfam Core-2/I-Branching enzyme 114 341 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11811 Seca-Chr4 258669097 258672708 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11811 - - gmx:100793448 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11811 4 258669097 258672708 Seca4g11811 4 258669097 258672708 ECH