Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11803 ATGGTAGAAATACACTCTGGTGAAAGTGGGCTAAGTACTTCCAACCGGTGCTTCCAGATAAAGATCACTGCACAGGATGACGAGGCAGATGGGTCAATCACTAATCCAGCTCAATTGGCATTGATCTTCTCACACACAGAAAAATATCCTGATGAACCTCCTCTTTTGAATTTGAAAAGTTTGCAAGGAATACCTGCTGAAGATTTAAAGAGTTTGAAAGAAAAACTTCAACAAGAGGCATCTGAAAATCTTGGTATGGCTATGATCTACACACTTGTCACCTCAGCTAAAGAGTGGTTGGCTGACCAGTTTGGTCAAGACTCTGTTGCTGCGAGTATTGAAGCAGAAGAGGCAGCCAAAGATGATATAGTGGTGCCCCATGGGGAACCAGTTACTGTTGAAACATTTTTGGCATGGAGAGAAAGGTTTGAAGCTGAACTTGCACTTGAACGAGCCAAGTTAATGCCAGAGTCTGCGCTTACAGCTCCCAAGGAGAAGAAACTCAGTGGTAGACAGTGGTTTGAAAGTGGAAGAGGGAAAGGTGCAACTATTGCCACTGAGGAATCCGATGAGGAGGACGAGGATGATATTGACTTTGATGAAGATGATTTCGAAGATGATGAAGAGGATATGCTTGAGCATTATCTGGCTGAAAAATCTGATTCATCCACACATTCTTCCAGGAGAGCTAGTTAA 696 0.431 MVEIHSGESGLSTSNRCFQIKITAQDDEADGSITNPAQLALIFSHTEKYPDEPPLLNLKSLQGIPAEDLKSLKEKLQQEASENLGMAMIYTLVTSAKEWLADQFGQDSVAASIEAEEAAKDDIVVPHGEPVTVETFLAWRERFEAELALERAKLMPESALTAPKEKKLSGRQWFESGRGKGATIATEESDEEDEDDIDFDEDDFEDDEEDMLEHYLAEKSDSSTHSSRRAS. 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11803 231 MobiDBLite consensus disorder prediction 159 208 - -
Seca4g11803 231 PANTHER RWD DOMAIN-CONTAINING PROTEIN 10 213 IPR040213 -
Seca4g11803 231 SUPERFAMILY UBC-like 2 102 IPR016135 -
Seca4g11803 231 Gene3D Ubiquitin Conjugating Enzyme 1 106 IPR016135 -
Seca4g11803 231 MobiDBLite consensus disorder prediction 187 208 - -
Seca4g11803 231 Pfam RWD domain 15 100 IPR006575 GO:0005515
Seca4g11803 231 ProSiteProfiles RWD domain profile. 1 103 IPR006575 GO:0005515
Seca4g11803 231 SMART RWD2001b 1 103 IPR006575 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11803 Seca-Chr4 258576402 258582771 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11803 - - gmx:100813322 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11803 4 258576402 258582771 Seca4g11803 4 258576402 258582771 ECH