Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11801 ATGTACGGCGGAGCCTCCTCCAAACTGGGCCGCGGGGCCCCAAAGCGAGGTCTCCACTCTTCTTTCCCCCCTCCTCCGCCCCCTCACCGTGCATCCGCCCCTTCCTCCCGCCTCTCCCTCGGCGGCTCCGCCCGCAAAGCGCCGCCGGCGGTGGAGGAGACGTTCAGCCTGGTCTCCGGCAACAACCCCCTCGCCTTCTCCATGATCATACGGCTGGCGCCCGACCTCGTGGATGAGATCAAGCGCGTGGAAGCACAGGGTGGCACCGCGCGTATGAAATTCGACCCCAACCCCCACAATTCCCACGGAAATATTATTAATGTTGGTGGGAAGGAGTTCAAATTTACATGGTCAAGGGAATTTGGTGACCTGTGTGATATTTATGAAGAGCGGCAAAGTGGTGAAGATGGAAAAGGTTTGCTTGTTGAATCTGGGTGTGCCTGGCGCAAGCTGAATGTACAGCGTATCTTGGATGAGTCAACCAAGAATCATGTCAAAATGCGGTCAGCGGAAGCCGAACGCAAGTTGAAGTCACGCAAAGCCATTGTTTTAGAGCCTGGGAACCCGTCTATGAAGAGCCAAATAAAGGCATTAGCAGCTGTTGAGGGTAATTTTTCTTTTGTTTCTTGTACTACACAATGGAAGAATTACAATAAAAAGAAAGAGGCTGCACTTAAGAAAAGGAAAGTGGAAACTCTTCAAGTTGGAGGGCCCCCAAAATCTTCCCATCGATCTGGATTGACATCAACAAGTACTGCTACCAAGGGCAGACACTCTTCTCCTCTTCCATCTCCACCTGAACATATTGCTGTTTCATCCTCTCCACTGGGAACTGTAAATACTAAGAGCATTGATGATGCTCTGCCATCACAGATGATGGGCAAGCAAGATACTAATGCTGTCTCTGAGAAGGAAATCCCTACCAGGACAAACAATGTTATGAGGAACACACCAGGAGGCAAAGGAAATAATGGATCTAAACCAATAGATTTGCAGGACATGTTAATTTCTCTTCTAAAGGATAAACCTAACGGAATGACTTTAAAGGCCTTGGAGAAAGCTGTTGGAGACACACTTCCAAATTCCATAAAGAAAATTGAGCCCATTATAAAAAAGATTGCAAAATACCAGGCCCCGGGAAGGTATATTTTAAAACCAGCAGTGGATTCAGAAAGCTTCAAGAAACCTCAGACTGAAAGTGGAAGTTCTCCTGAAGAGAATCATAACCAGATACCTGCTCGTGAAGAGTTTCATGATCAGAGATCAGCTTTGCAGGGAGGCATGGAAGAGAAAGTCCCAAATGACAATTTGGAGGAAATGGTGCAAGTAAAATCCAAAGTGGAAGAATTGAACACATTGGAAAAAGTTGATGCTCAACATACTTTGCCTGATATCTTTGGTGACAAAAAAGGTTCTGATCATAGTGAAGGGCAGGCAGGCAGCTCTAGTGATAGTGGAAGTGACAGTGATAGTGAAAGTGACAGCAGTGATAGTGGAAGTGACAGTGGAAGCCATAGCAGGAGCAGAAGTAGAAGTCCTGCTGGATCACGGAGTGGGAGTAGCAGTGACAGTGAAAGCGATGCATCTTCCAGCAGCAAGGAGGGACTGGAGGGTTCTGATGAGGATGTAGATATTATGACTAGTGATGATGAAAAAGAGTCAAAGCACAAAACAGAAGCCCCTGATCAAAGGATGTCCTTGCCCATTCCAGTAAAATCTCCTGATGGAAGATCTATGCAGAATGAGGTTGATGAGAAGGAGGATGGTAATGAATCTGATGCAGTTGAGATTGAAAAAGACTTACCTGAGGAACAGGAAGCTGAAATGGCTCTAGCTACAGCTACCCTTTCTGATAAAGGTGGAAAACATGCAGAAGAGACAAAACCTTTTTCACCCTATTATCAACAGTACCAGGAGCGCCAAAATTATATAGGGAGTTTGTTTGATGAAAGGGAGAATGAAGTTAAAGATAGCTCTAGGCATGAACAGTCGGACAGCTCTGATAGGTTATCTAAAGGTAAACATAAGAGGGGTTCTGATGTGAAGAACACTGATGAGAAATCTGAACGTGCAAAGAGGTTGAAAGCAGGAAACTCGACTCATGATCCTTTTTCTCCTGGTACAGATATGCAAATGTTTGAAAATTCTCGAAATTTTTCTCCTGTTGAATTTACTGAAGACACTTCTAAGGGCCCTACTAGACAAGCAGTGAATAGAGTTGATAGACAAGGAAATTCCAGTGCTGGTTTACAGAAAGGATACAATAGAGGATTTCCTGGAAAATCTAGTTCAGATTTACCACAGACAGGTCCAAGGTCATTTGACCAAACCCCTCTAGGAAACTCTTCCTATCCATTGGAAAAATCAGATAAACATGGTGAAAGCATAAGGCACAGCAAAAAACACTCAGGTAAGGACTTTCATGCACGTGAAGTTTCTTCTGTGCATAAAGATAAATCTCAAAGAGATGCCCAAAATGAAGATATCCATGCCACTGAGAAAAAAGTCCCCAGGAATTCCAGGGATGGTAGTAATGGAAGTAAACAACCACTATCCATGGATTCTAATTACCAAAAACAAGGTGAAATGGTTGGTAAGTTAAAGGAAGGCCGACAAGGTACACAGTCACACTTGGGAACATCACCTAAGGACAACAACAGAATCAGTCTTGATAAATCCCCTGTAGTTAATGGGCGAGGTGTCTCACTTCAAAGAGAGCTTTCAGACTTGGAGTTGGGTGAACTTCGTGAGTCCACTCCTGACGAAACTCATGTGACAAAGCAATTTGAAAGAAAAGGTTCATTTAAACAATTAGAAAACAAAGCAAACACTTCAGAGGACAGGAATTCAGATATTACTAAAGTAAAACCTTCATTGAAAGCAACTTTAGATTCAGGAAAGCCATCCTCAAATTTTGTAAGTTCTGGTTTTCCCAGTAATTTGGAAAGCACAAGTAAAAAGAACGCAGATAATCATTTTGAAGATTCAACCAAGACTCGTTCTAGAGTTATGCAGGCTCATTCACAACACTTGAAAGCAGATAATGTGGAAGTTGGATCTCAGAACAAATTGACGGAAATGAGCACTAAATATAGAAATAATGAATCTGGGGTGAACCAAGATATTGATTTGGATGGTCGTAGTGAAAGCAATAGAAGAGCACCTGCAAATGTGTCCAAACAAGACACAAAACGTGGAACAATTTCCTACCCTGTGAAAGAAAATAAAAGACAAACACCTAATCCGTTTGAAGATGTGGCTGATGGAGGAAAGGATTCAATATTTGCAGATAGAAATAATAGCGACCCAAAGAAGAGAGAATCTTCTTCAGATGAAAACAGTTGCTCTTATTCAAAGTATGAAAAGGACGAACCTGAATTGAAGGGACCTATAATGACTTTCTCCCAATATAAAGAATATGTGCAGGAGTATCGTGACAAATATGATAGTTACTGCTCCTTGAACAAGATTTTGGAAGGCTACAAGGACGAGTTTCTGAAACTAGGCAAGGATTTAGACTATGCTAAAGGCAGGGGGGATATGGATAGGTATTATGACGTAGTGAGGCAGCTGAGGGAATCCTATCGGCGATGTGGACTGAGACACAAGAGATTGAAGAAAATATTTACTGTGCTTCACGAGGAACTGCAGAATATTAAGCGAAGGGTCAAAGAATTTGCAGAAATATATAATAAGTCTTGA 3702 0.4281 MYGGASSKLGRGAPKRGLHSSFPPPPPPHRASAPSSRLSLGGSARKAPPAVEETFSLVSGNNPLAFSMIIRLAPDLVDEIKRVEAQGGTARMKFDPNPHNSHGNIINVGGKEFKFTWSREFGDLCDIYEERQSGEDGKGLLVESGCAWRKLNVQRILDESTKNHVKMRSAEAERKLKSRKAIVLEPGNPSMKSQIKALAAVEGNFSFVSCTTQWKNYNKKKEAALKKRKVETLQVGGPPKSSHRSGLTSTSTATKGRHSSPLPSPPEHIAVSSSPLGTVNTKSIDDALPSQMMGKQDTNAVSEKEIPTRTNNVMRNTPGGKGNNGSKPIDLQDMLISLLKDKPNGMTLKALEKAVGDTLPNSIKKIEPIIKKIAKYQAPGRYILKPAVDSESFKKPQTESGSSPEENHNQIPAREEFHDQRSALQGGMEEKVPNDNLEEMVQVKSKVEELNTLEKVDAQHTLPDIFGDKKGSDHSEGQAGSSSDSGSDSDSESDSSDSGSDSGSHSRSRSRSPAGSRSGSSSDSESDASSSSKEGLEGSDEDVDIMTSDDEKESKHKTEAPDQRMSLPIPVKSPDGRSMQNEVDEKEDGNESDAVEIEKDLPEEQEAEMALATATLSDKGGKHAEETKPFSPYYQQYQERQNYIGSLFDERENEVKDSSRHEQSDSSDRLSKGKHKRGSDVKNTDEKSERAKRLKAGNSTHDPFSPGTDMQMFENSRNFSPVEFTEDTSKGPTRQAVNRVDRQGNSSAGLQKGYNRGFPGKSSSDLPQTGPRSFDQTPLGNSSYPLEKSDKHGESIRHSKKHSGKDFHAREVSSVHKDKSQRDAQNEDIHATEKKVPRNSRDGSNGSKQPLSMDSNYQKQGEMVGKLKEGRQGTQSHLGTSPKDNNRISLDKSPVVNGRGVSLQRELSDLELGELRESTPDETHVTKQFERKGSFKQLENKANTSEDRNSDITKVKPSLKATLDSGKPSSNFVSSGFPSNLESTSKKNADNHFEDSTKTRSRVMQAHSQHLKADNVEVGSQNKLTEMSTKYRNNESGVNQDIDLDGRSESNRRAPANVSKQDTKRGTISYPVKENKRQTPNPFEDVADGGKDSIFADRNNSDPKKRESSSDENSCSYSKYEKDEPELKGPIMTFSQYKEYVQEYRDKYDSYCSLNKILEGYKDEFLKLGKDLDYAKGRGDMDRYYDVVRQLRESYRRCGLRHKRLKKIFTVLHEELQNIKRRVKEFAEIYNKS. 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11801 1233 MobiDBLite consensus disorder prediction 701 784 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 454 1122 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 1052 1076 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 1090 1122 - -
Seca4g11801 1233 Pfam Occludin homology domain 1129 1227 IPR010844 -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 387 412 - -
Seca4g11801 1233 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 10 1232 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 1002 1044 - -
Seca4g11801 1233 SUPERFAMILY occludin/ELL-like 1130 1228 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 271 302 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 393 408 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 228 302 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 238 259 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 548 562 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 909 954 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 842 859 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 873 892 - -
Seca4g11801 1233 ProSiteProfiles Occludin/ELL (OCEL) domain profile. 1122 1231 IPR010844 -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 787 841 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 645 697 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 963 986 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 496 533 - -
Seca4g11801 1233 Gene3D - 1133 1229 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 454 475 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 1 45 - -
Seca4g11801 1233 MobiDBLite consensus disorder prediction 987 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11801 Seca-Chr4 258553558 258562708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11801 - - gmx:102660010 1836.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11801 4 258553558 258562708 Seca4g11801 4 258553558 258562708 ECH