Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g11760 | ATGCAGGTGATGAAGAAGACCCATTATTATTTAGTAGATACAAGTGTTATCATACCTGGTGCTGCAGTCTCAGAGCTGCAATTCAATATCATATCTGAAGAACCATTTTTTGTACATGGATTGAAGTTTACCCCATTACCAGTGTGGCATGGCCAGAATTATCGCTCCCTTGGTTTTCGTTTTGGCAATATATGTTACATAAGTGATGTCAGTGAAATTCCTGAAGAAACTTATCCACTTTTGAAGGACTGTGAAGTTCTCATCCTGGATGCGTTGAGGCCTGATCGCTCTACAGCCACACATTTTGGACTTCCAAAGGCCTTAGAGGAAGTTCGAAAAATTCAACCCAAAAGGACACTTTTTACAGGTATGATGCATCTGATGGATCATGAAGAAGTGAATGACTATCTTAAAAAACTAATGGAGTCTGAGGGCCTTGATGCACAACTGAGCTATGATGGGCTTCGTATACCAGTCACACTCTAG | 486 | 0.4074 | MQVMKKTHYYLVDTSVIIPGAAVSELQFNIISEEPFFVHGLKFTPLPVWHGQNYRSLGFRFGNICYISDVSEIPEETYPLLKDCEVLILDALRPDRSTATHFGLPKALEEVRKIQPKRTLFTGMMHLMDHEEVNDYLKKLMESEGLDAQLSYDGLRIPVTL. | 162 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g11760 | 161 | PANTHER | HYDROLASE C777.06C-RELATED-RELATED | 1 | 160 | - | - | |
| Seca4g11760 | 161 | Pfam | Beta-lactamase superfamily domain | 30 | 122 | IPR001279 | - | |
| Seca4g11760 | 161 | SUPERFAMILY | Metallo-hydrolase/oxidoreductase | 29 | 159 | IPR036866 | - | |
| Seca4g11760 | 161 | Gene3D | - | 1 | 160 | IPR036866 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca4g11760 | Seca-Chr4 | 257950474 | 257951893 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca4g11760 | - | - | gmx:100786919 | 302.367 |