Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11706 ATGGGCCACCCTAGTTCAACAACCAAAGATGATGTTGCCCCAAAGAAAGGGTACTGGAGAAAGTTTATAGAACATGTAGGGAGTTGGATGGCACATAAGGACAAGGATGAATGGTTGAAGGACATGAGAGGGAACCTTAGTTTGGTGGCTACTGTGATCTCAACTATGACCTTCCAATTTGCTTATAATCCACCGGGTGGCGTTAGGCCCGCAAAAGATAGTGGAGATCATATCGCATGTACAAATGACGACGGAAACGACCTGATCACACCATGTCCTGGAGAAGCTATCTTAGCTGTCGTATATCCTCATGATTACTTGAACTTCCTTTATTGGAACACCGTCTGTTTCGTTGCATCACTCAGTGTTTGTCTCTTGCTCGTAAGTGGAATCCCTATTCATCACCGCTTTCCCATGTGGCTCTTGTCAATTGGAATGTGCATCACTCTCACAAGTCTCGCACTTACTTACTTAACGGCTGTCAAAATGGTCACCCCTGATCCTGTTTTTGGTCCAACTACCACTATTTATGAAAAGTTGCTTTATGGTTGGATTGGATTGTTAGGACTCCTTGGTTTCTTCCTCACGCTACGCTTTCTTATTTGGGCTGTCAATTTATTCATCAATAAAACTAGTAAGGCTTCCAAAAATACCAAGGACCAGGAGATCAATTCAGTCACTACTCATTTATAA 693 0.4286 MGHPSSTTKDDVAPKKGYWRKFIEHVGSWMAHKDKDEWLKDMRGNLSLVATVISTMTFQFAYNPPGGVRPAKDSGDHIACTNDDGNDLITPCPGEAILAVVYPHDYLNFLYWNTVCFVASLSVCLLLVSGIPIHHRFPMWLLSIGMCITLTSLALTYLTAVKMVTPDPVFGPTTTIYEKLLYGWIGLLGLLGFFLTLRFLIWAVNLFINKTSKASKNTKDQEINSVTTHL. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11706 230 PANTHER CASKIN 33 207 - -
Seca4g11706 230 Pfam Domain of unknown function 37 160 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11706 Seca-Chr4 257205195 257209558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11706 43 188 Miscellaneous Gene Families AT1G14480 26.667 2.85e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11706 - - aprc:113851037 297.745