Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11608 ATGGTGAAATCGGATACCAATAAGTCGTCAAAGAATACGGAGGACGTCGACCTTCTCAAATCCGAAGTAGCCTCTTTCGCTTCTTCGCTTGGCTTGTCCACTTCCCAATCCTATTCAGGCTTCAACGATGTCGATTTTCGCAAAACCAAGCCAAACAAACCACCGAAAAAGAAACAAACACCTGAAGAAGTCACACCCCAAAACACCCAGAAGCCAAAAAACAAAACTTCAAGCAAACAAAATGGACCACATGAGAAACCTAACCCCAAACCCAAACCCAAACCCCCTGTTCTGTCAGTAGATGATGCCAATAAGGAAAAAGGGTTCAACAAGTTTAGGAATCTTCCCAAGCTTCCTTTGATGAAAGCAAATGCTTTGGGTGTGTGGTTTGAGGACGCGGCTGAGCTGGAAGCAAAGGTGATCGGGGAGGGGAAGAGGGTGGAGATGAGGAACGTGGAAGAGTGGAAAGGTTTTGTGGAGAAGAAGAGGGAAATGGGTGAGAGGTTGATGGCACAATATGCTCGTGATTATGAGTCAACCAGGGGTAACAGTAGCGATATTAAGATGTTGGTTTCTACACAGAGGTCAGGGACTGCCGCTGACAAAGTATCTGCATTCTCTGTGTTGGTGGGGGACAATCCAATTGCAAACCTGCGCTCTCTTGATGCTCTTTTGGGAATGGTGACGTCCAAGGTTGGAAAGCGCCATGCCTTGACAGGTTTTGAAGCACTTCAAGAATTATTTATTGCAAGCTTATTACCAGATCGTAAATTGAAGACCCTGATACAGCGGCCTCTAAATCACGTTCCTGAAACTAAAGATGGTTACTCCCTTCTACTTTTCTGGTATTGGGAGGAATGTTTGAAGCAGAGATATGAACGGTTTGTTGTCACACTCGAAGAAGCATCCAGAGACATGCTACCTGCTCTGAAAAATAAGGCAACAAAGACCGTATATATGCTACTGAGTAGGAAGTCAGAGCAAGAGCGCAGGCTACTTTCTGCACTTGTTAACAAACTTGGGGATCCAGATAATAAGGCAGCATCTAACGCTGACTTTCACTTGTCCAACCTTCTGTCTGACCACCCAAATATGAAGGCTGTGGTTATTGACGAGGTGGATTCTTTTCTCTTTCGGCCTCATTTAGGACCACGTGCACAGTACCATGCTATCAACTTCCTGAGCCAAATCCGACTCACAAATAAAGGAGATGGGCCAAAAGTGGCGAAACGTCTGATAGATGTGTATTTTGCACTGTTTAAGGTAGGAAAAATGGGGAAAATACTCACAATTAGAGTTATTCAGGTTTTGATCAATGGGGCAAGCAGCAATGAAAAGTTTGATAAAAATGGCAAGGTGAATCCAAAAGAGGAAAAATCAAAAGGGTTATCTGAATCACATGCAGAATTGGACTCCCGGCTTCTATCAGCTCTCCTAACTGGAGTGAATAGAGCATTTCCTTTTGTCTCAAGTAATGAAGCTGATGACATTGTCGATGTTCAAACACCAGTACTTTTCCAATTGGTTCATTCAAAGAATTTTAATGTAGGAGTTCAAGCACTGATGCTTCTCGATAAAATTTCATCCAAGAATCAGATAGCCAGTGATCGGTTTTACCGTGCTTTGTACTCCAAACTTTTGCTTCCAGCTGCCATGATTACATCCAAGGCAGAAATGTTTATTGCGCTTCTTCTTAGAGCAATGAAAAGGGATGTTAATTTAAAGCGTGTAGCTGCGTTTTCTAAACGTCTATTGCAGATAGCGCTACAGCAGCCACCACAATATGCCTGTGCTTGCCTTTTCCTTCTTTCTGAACTCCTTAAAGCCAGACCACCTTTATGGAACATGATGTTGCAGAACGAATCTATTGATGAGGAACTTGAACACTTTGAAGATGTTATAGAGGAAACAGATAATGAACCTAAAACTGTATCAAATAAACAAAATGATGATATTGGACTTGTTCAGAATGGTGAGGATGCCGATTCTGGCACCAGTTCTTCAGAAAGTGAAGATGATCTTCCAGCATCTTCTGAAGATGATGATTCAGATGATGCTTCAGAGGATGCAGATTTTTCACTTGTAAAGAGTGAAATTGATCACAAGAATTCGAAGTCTATATCTGACAATGAAGGTCAGCAATCACAGGCATCTGCCAAGAAGTCTTTCCTGCCTGGAGGCTATGATCCGCGACACAGAGAGCCTTCTTATTGCAATGCAGACCATGTAAGTTGGTGGGAGTTAATGGTACTTGCTTCCCATGCACACCCTTCAGTTTCTACTATGGCCGGAACTCTTCTTTCTGGGGCCAACATTGTCTATAACGGAAACCCATTACATGACCTGTCTCTGACAGCTTTCCTAGACAAATTCATGGAAAAGAAACCAAAACAAAGCACATGGCATGGTGGTTCTCAGATTGAACCTGCCAAGCAGATGGATGTTAACAACCATTTGATTGGGTCAGAAATTCTTTCACTGGCTGAAGTAGATGTACCACCAGAGGATCTTGTCTTCCACAAATTCTATACAAACAAAATGAGTTCTTCAAAACCGAAGAAAAAGAAGAGGTCAGCTGATGAGGAGGCTGCTGAGGAGTTGTTTGATGTTGATGATGGTGAGGTTGATGGTGGGGATGAGAGTGATAATGAAGAGATCGAGAATCTATTGGATTCTGCTGATCAGGAATCAGATGGTGGCTATGATTATGATGATTTAGACAAAGTAGCCAATGAGGATGATGAGGACTTGATTGGTGATGTTAGTGATACAGAGATAGATATAGCCTCAGATATGGGAGAGGAAGACACTGATGCTCCAATTGATGATGATGGCAGTGATGATAATAATGATCTTGACATTGGAGATATTGATGATGCCTCTGATGATGAGGATGCTGTTGACAAAAGCAAAAGAAAACGTAAAACTGGTGGCAAGAAGAGTGGTGTGTCTCCATTTGCTAGTTATGAACAGTTTGAGCATCTAATGGAAGATGATGACCATACTGAGAAAACACCTTCCCAAAAGAAACACAAGTCTAAGAAAAGAAAAAAGTAG 3057 0.4226 MVKSDTNKSSKNTEDVDLLKSEVASFASSLGLSTSQSYSGFNDVDFRKTKPNKPPKKKQTPEEVTPQNTQKPKNKTSSKQNGPHEKPNPKPKPKPPVLSVDDANKEKGFNKFRNLPKLPLMKANALGVWFEDAAELEAKVIGEGKRVEMRNVEEWKGFVEKKREMGERLMAQYARDYESTRGNSSDIKMLVSTQRSGTAADKVSAFSVLVGDNPIANLRSLDALLGMVTSKVGKRHALTGFEALQELFIASLLPDRKLKTLIQRPLNHVPETKDGYSLLLFWYWEECLKQRYERFVVTLEEASRDMLPALKNKATKTVYMLLSRKSEQERRLLSALVNKLGDPDNKAASNADFHLSNLLSDHPNMKAVVIDEVDSFLFRPHLGPRAQYHAINFLSQIRLTNKGDGPKVAKRLIDVYFALFKVGKMGKILTIRVIQVLINGASSNEKFDKNGKVNPKEEKSKGLSESHAELDSRLLSALLTGVNRAFPFVSSNEADDIVDVQTPVLFQLVHSKNFNVGVQALMLLDKISSKNQIASDRFYRALYSKLLLPAAMITSKAEMFIALLLRAMKRDVNLKRVAAFSKRLLQIALQQPPQYACACLFLLSELLKARPPLWNMMLQNESIDEELEHFEDVIEETDNEPKTVSNKQNDDIGLVQNGEDADSGTSSSESEDDLPASSEDDDSDDASEDADFSLVKSEIDHKNSKSISDNEGQQSQASAKKSFLPGGYDPRHREPSYCNADHVSWWELMVLASHAHPSVSTMAGTLLSGANIVYNGNPLHDLSLTAFLDKFMEKKPKQSTWHGGSQIEPAKQMDVNNHLIGSEILSLAEVDVPPEDLVFHKFYTNKMSSSKPKKKKRSADEEAAEELFDVDDGEVDGGDESDNEEIENLLDSADQESDGGYDYDDLDKVANEDDEDLIGDVSDTEIDIASDMGEEDTDAPIDDDGSDDNNDLDIGDIDDASDDEDAVDKSKRKRKTGGKKSGVSPFASYEQFEHLMEDDDHTEKTPSQKKHKSKKRKK. 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11608 1018 Coils Coil 620 640 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 864 963 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 992 1007 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 848 1018 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 637 728 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 28 43 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 28 102 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 61 84 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 46 60 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 689 707 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 646 672 - -
Seca4g11608 1018 MobiDBLite consensus disorder prediction 673 688 - -
Seca4g11608 1018 SUPERFAMILY ARM repeat 289 613 IPR016024 -
Seca4g11608 1018 PANTHER CCAAT-BINDING FACTOR-RELATED 7 1013 IPR040155 -
Seca4g11608 1018 Pfam CBF/Mak21 family 518 763 IPR005612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11608 Seca-Chr4 255939640 255947252 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11608 K14832 - gmx:100814566 1474.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11608 4 255939640 255947252 Seca4g11608 4 255939640 255947252 ECH