Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11606 ATGGAGATTGCAAGGGAGAAGCTGCAGAGTAGTGTTGTTGTTGCAGATGGAGCTGACCCCAAGTCCTGCTATATGCAGAAGTTCAGGCTCTATGAAACCCGCTCGAGATTTTATATGATTGGAAGAGACAAAAACAGAACATTTTGGAGGGTCTTAAAGATTGATAGATTGGAGCCATCTGAATTAAATATCATCGAAGATTCAACAGTATACTCAGAAATTGAGTGTTGTGACCTTCTGAGGCGGATACATGAAGGAAACAAGTCAACAGGGGGGCTTAAATTTGTAACAACTTGCTATGGAATCATCGGATTCATCAAATTTCTTGAGCCATACTATATGCTGCTTATAACAAAACGAAGGAAGATCGGCACAATATGTGGGCACACTATATATGCTATCACAAAGAGCGAAATGGTTCCAATTCCACATGCAACCGTGCGATCCAAAATGGCATATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTACGAAGGACTTCTTTTTCAGCTACTCATACAATATCATGCTTAGTCTTCAAAAGAATTTATCTGGCCATAATACTATGGGACAATCACTTTATGAAACACTATTTGTTTGGAATGAGTTCTTAACTCGTGGAATCAGGAATAATATCCAGAATACTTCCTGGACAGTTGCCTTAGTGTATGGCTTTTTTAAACAGTTCAAACTTTCTATATCTGGCAGTGAGTTCAACTTGATTATCATTGCTCGACGCTCAAGGCATTATGCTGGAACCAGATATTTGAAACGAGGAGTGAATGAAAAGGGTAGAGTAGCAAATGATGTTGAGACAGAGCAGATAGTCTTTACAGATGCTCGTGATGGATGCCCAATGCAAATCAGTTCTGTTGTGCAGATCCGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAGCCTCACCATTGAATATAAAACCTGACATTATATTATCAAGGAAGGACAGTAGTTTTGAAGCCACAAGACTTCATTTTGAAAATCTTGTCAAGAGATATGGAAATCCAATTATTATATTGAACTTGATTAAGACACGTGAGAAGAAGCCTCGAGAAACTATTCTGCGAGCCGAGTTTGCTAATGCAGTTAGATCTATTAATAAGAATTTGAAAGGGGAAAATCGCCTGAGGTTCCTTCATTGGGATCTGCATCGGCACTCTAGATGCAAAGCTACCAATGTGTTGGGACAACTGGGAAAAGTGGCTGCATATGCATTGAAACTAACTGGAATCTTTTACTGTCCAATGACACTGAATTCGGGCCACGAGGGATTACTCCAATCTTCGTATTCTGATATGAACAAGGATATTGTTGATAAGGAAACAAAAGTTAGCAATTGTTACTATAGTGGTAATGAGAACAAAGATTACAATGTCAAACCCCAGATGCTTCAAGCAGGTGTTTTGAGGACTAATTGCATAGACTGTTTAGATCGTACCAATGTTGCACAATATGCTTATGGCCTAGCTGCACTTGGACGTCAGCTACAAGTTTTAGGATTTATTGAATCTCCTTATATTGATCTTGATAATCCTTTAGCAAAGGAATTAATGGCAGTTTATGAATCCATGGGCGACACATTAGCTTTTCAATATGGGGGTTCTGCAGCGCACAATAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCAACACAATCCCAGGAATTTATTCGAACCCTACAGCGTTATTATAACAATACATATTTGGATGGCGATAAACAAAAAACAATAAATATATTCTTGGGGCATTTTCAGCCACAACAGGGAAAACCGGCACTGTGGGAGCTAGATTCAGATCAACATTACACTGCTGGGAAACGTGGCCCATATTCAGCAGATGACAGTGTTAGGCCAACTATTAAAAGATCTCTATCAGATGGTAACATTCTCTGTGAAAGTGACACCACAATTAGGAACTTGAATGCTGCAGATTGTCAGCAATCATCTGAAAAACCTGATAAACGTTTTCTTTTGGACTCTGCTTCAGACATGCTTACTTGTGGAAGTTCTATTTGTCATTGCAGGTATGCCTAA 2073 0.3941 MEIAREKLQSSVVVADGADPKSCYMQKFRLYETRSRFYMIGRDKNRTFWRVLKIDRLEPSELNIIEDSTVYSEIECCDLLRRIHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHTIYAITKSEMVPIPHATVRSKMAYSKDENRYKKLLCSVDLTKDFFFSYSYNIMLSLQKNLSGHNTMGQSLYETLFVWNEFLTRGIRNNIQNTSWTVALVYGFFKQFKLSISGSEFNLIIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVFTDARDGCPMQISSVVQIRGSIPLFWSQEASPLNIKPDIILSRKDSSFEATRLHFENLVKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINKNLKGENRLRFLHWDLHRHSRCKATNVLGQLGKVAAYALKLTGIFYCPMTLNSGHEGLLQSSYSDMNKDIVDKETKVSNCYYSGNENKDYNVKPQMLQAGVLRTNCIDCLDRTNVAQYAYGLAALGRQLQVLGFIESPYIDLDNPLAKELMAVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAATQSQEFIRTLQRYYNNTYLDGDKQKTINIFLGHFQPQQGKPALWELDSDQHYTAGKRGPYSADDSVRPTIKRSLSDGNILCESDTTIRNLNAADCQQSSEKPDKRFLLDSASDMLTCGSSICHCRYA. 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11606 690 ProSiteProfiles Sac phosphatase domain profile. 164 545 IPR002013 GO:0016791
Seca4g11606 690 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 19 668 IPR043573 GO:0043813|GO:0046856
Seca4g11606 690 Pfam SacI homology domain 100 398 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11606 Seca-Chr4 255915328 255924484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11606 25 650 Acyl Lipid Metabolism Gene Families AT5G20840 64.567 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11606 K22913 - gmx:100806380 1223.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11606 4 255915328 255924484 Seca4g11606 4 255915328 255924484 ECH