Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11577 ATGCGGAAATCCGCTGCAGACAGATTCAGGCATCTTCTCAATCGTTCACTTGTTCTTGTTCGCCATCACAATCACCATCACCATCAAAAGCACCACCCTTCTTCTCTCTCTTCCTACCACCCTTCTTCTCGCTCCCATTTCTTCTCTTCTACTCCTTCAATGGCTCCCACCCCTTCTTCCGATTCCCCTTTCCCTGTTACCGTCCACAACATCAACCCCAAGGTTCTGGAATGTCAATATGCTGTTCGAGGAGAGGTTGTCACAGTTGCCCAGAATTTGCAAAAGGATTTACTGGCCAATCCAGACTCTCATCCATTTGATGAGGTACTTCTCCTTTTCAACTTCATATCTTCTAGAGTAGAACTCCTTGAGTTTTTTATTCTCAGAATGACTTCTAAAGGGCAGCCTGATGGTGCTATAGTAGGCAGCCTTACCTTGTGGACACAACTTGAACCTGTGAGGCTGTGCTCTCCAGGTTACATGATACTTTACTGCAACATTGGAAATCCTCAGTCTCTTGGCCAGCAGTCAATAACTTTTTTCCGTGAGGTTCTTGCATTATGTGACTATCCCGCTCTTTTGGACAAAAGTGAAACACAGGGTTTGTTCAGTGCTGATTCAATAGACCGGGCTTGGCAGATTATGGATCAGATTCCTGGGAGAGCAACTGGTGCCTATAGTCATAGTCAGGGTGTTAAGGGCTTGCGTGATTCAATAGCTGCTGGAATTCAAGAGCGAGATGGTTTTCCTGCTGATCCCAATGACATTTTCTTGACAGATGGTGCAAGCCCAGCAGTCCATATGATGATGCAATTACTCATAAGATCGGAACATGATGGTATTCTGTGTCCCATCCCTCAGTACCCTCTGTACTCGGCCTCAATTGCCCTCCATGGTGGCTCCCTGGTACCTTATTATCTAGATGAAGCAACTGGTTGGGGGTTGGAAATATCTGAAGTTAAGAAGCAATTGGAGGCTGCCAAGTCCAAGGGCATCAGTGTCAGGGCTTTAGTTGTTATAAATCCTGGCAATCCCACAGGACAGGTTCTTTCTGAGGAAAATCAACGGGCCATAGTAGAATTTTGCAAGAAAGAAGGTTTGGTTCTTTTGGCTGATGAGGTATATCAAGAAAATGTTTATGTTCCTGAGAAGAAATTTCACTCTTTTAAGAAGGTATCCCGGTCCATGGGATATGGTGAAAATGATATCACCTTAGTATCTTTCCAGTCAGTTTCCAAAGGCTATCATGGGGAGTGTGGGAAACGAGGAGGTTATATGGAGGTGACTGGATTTTCGGCAGAAGTGAGGGAACAGATATATAAAGTGGCATCTGTGAATCTTTGTTCCAATATCTCTGGTCAAATTCTTGCAAGTTTGATCATGAGTCCACCTAAGGTTGGAGACGAGTCCTATGAATCATTCATGGCTGAGAAGGAGAATATTTTATCCTCCCTTGCTAGGCGCGCAAAGACACTGGAAGAAGCTTTTAACAAATTAGAGGGTGTAACATGCAACAAAGCAGAAGGGGCAATGTATCTGTTTCCCCGTATTCGCCTGCCTGAAAAGGCTATCAAAGCTGCAGAGGCTGCTAAGACAGCACCTGATAACTTCTATTGTAAACGCTTGCTCAATGCCACAGGAGTAGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCTGGCACATGGCATTTTAGGTGCACCATTTTGCCTCAAGAAGATAAGATTCCGGCCATTGTCACCCGCTTGACAGAGTTCCATAAAAAGTTCATGGATGAGTTCCGTGGTTGA 1791 0.4484 MRKSAADRFRHLLNRSLVLVRHHNHHHHQKHHPSSLSSYHPSSRSHFFSSTPSMAPTPSSDSPFPVTVHNINPKVLECQYAVRGEVVTVAQNLQKDLLANPDSHPFDEVLLLFNFISSRVELLEFFILRMTSKGQPDGAIVGSLTLWTQLEPVRLCSPGYMILYCNIGNPQSLGQQSITFFREVLALCDYPALLDKSETQGLFSADSIDRAWQIMDQIPGRATGAYSHSQGVKGLRDSIAAGIQERDGFPADPNDIFLTDGASPAVHMMMQLLIRSEHDGILCPIPQYPLYSASIALHGGSLVPYYLDEATGWGLEISEVKKQLEAAKSKGISVRALVVINPGNPTGQVLSEENQRAIVEFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGENDITLVSFQSVSKGYHGECGKRGGYMEVTGFSAEVREQIYKVASVNLCSNISGQILASLIMSPPKVGDESYESFMAEKENILSSLARRAKTLEEAFNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAAKTAPDNFYCKRLLNATGVVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVTRLTEFHKKFMDEFRG. 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11577 596 MobiDBLite consensus disorder prediction 22 61 - -
Seca4g11577 596 CDD AAT_like 226 585 - -
Seca4g11577 596 Gene3D Aspartate Aminotransferase, domain 1 65 114 IPR015422 GO:0003824
Seca4g11577 596 Gene3D - 224 470 IPR015421 GO:0003824
Seca4g11577 596 MobiDBLite consensus disorder prediction 35 61 - -
Seca4g11577 596 Pfam Aminotransferase class I and II 221 569 IPR004839 GO:0009058|GO:0030170
Seca4g11577 596 FunFam alanine aminotransferase 2 224 470 - -
Seca4g11577 596 Gene3D Aspartate Aminotransferase, domain 1 161 594 IPR015422 GO:0003824
Seca4g11577 596 Gene3D - 173 223 - -
Seca4g11577 596 PANTHER ALANINE AMINOTRANSFERASE 158 595 IPR045088 GO:0008483
Seca4g11577 596 FunFam Alanine aminotransferase 2 173 223 - -
Seca4g11577 596 SUPERFAMILY PLP-dependent transferases 209 586 IPR015424 -
Seca4g11577 596 Coils Coil 475 502 - -
Seca4g11577 596 FunFam Alanine aminotransferase 2 468 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11577 Seca-Chr4 255502116 255507871 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11577 K00814 - gmx:100776235 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11577 4 255502116 255507871 Seca4g11577 4 255502116 255507871 ECH