Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11571 ATGAGAGAGCCCAGAGATGGAACAACCAAGACCGATAACAGGACTACCAAATCTGCATCATCCCCTGCCTCCTTCCCTCTCATTCTTGACATTGACGACTTCAAGGGAGACTTCTCGTTCGATGCGTTGTTCGGGAACCTGGTGAATGAGCTTCTTCCTTCTTTCAAATTAGAAGAAGCGGAATCGGACGGCGGTGATTCTCTGCCGAATGGTCATCTGCGAGCGCCATCGGCTGATGCGATCAAATTTTCGCAGGGGGTTTCCAGCCCTTTGTTCCCTGAGGTTGAGAAGCTCTTGTCCCTCTTCAAGGATTCTTGCAAGGAGCTACTTGAGCTCCGTAAACAGATCGATGGGAGACTCTACAATCTTAAGAAAGATGTTTCTGTTCAAGACTCTAAGCATAGAAAGACACTTTCTGAGCTAGAGAAAGGTGTAGATGGATTATTTGATAGCTTTGCAAGATTGGATTCACGTATTTCAAGTGTTGGCCAGACAGCTGCAAAGATAGGAGATCATCTCCAGAGTGCAGATGCTCAGCGAGAAACTGCCAGTCAAACAATTGAGCTGATAAAATACCTAATGGAGTTCAATAGCAGCCCAGGCGATCTGATGGAGCTTTCACCTCTTTTTTCTGATGATAGCCGTGTTGCTGAGGCTGCTTCAATCGCCCAAAAATTGCGGTCATTTGCGGAGGAAGATATTGGAAGACACGGAATAGCTGTTCCATCAGCTGTGGGCAATGCAACTGCTAGCAGAGGATTAGAAGTTGCTGTTGCTAATTTACAGGACTACTGTAATGAACTGGAGAATAGGTTGCTATCTCGGTTTGATGCAGCGTCACAGAAAAGAGAATTGACCACAATGGCAGAATGTGCCAAAATTTTGTCTCAGTTCAACAGGGGCACAAGTGCCATGCAACATTATGTGGCAACACGTCCAATGTTTATTGATGTGGAAGTAATGAATGCGGACACTAGACTGGTTCTTGGTGAACAGGCTGCACAAGCTAGTCCTAGCAATGTTGCTCGTGGGCTTTCCTCCTTGTACAAAGAAATCACAGATACTGTTCGCAAAGAGGCTGCAACAATCACGGCTGTATTCCCTTCACCCAGTGAAGTTATGTCAATTTTAGTTCAGCGAGTTTTAGAGCAGCGAGTCACTGGCCTTCTGGACAAACTGTTAGTGAAACCATCTCTTGTGAATTTACCTTCCATGGAGGAAGGTGGGCTCCTATTATATCTTCGAATGCTGGCAGTGGCATATGAAAAAACCCAAGAACTTGCTAGAGATCTACGAGCTGTTGGATGTGGTGACTTGGATGTTGAGGGTCTGACAGAGTCCTTGTTTTCAACTCACAAGGATGAATACCCTGAATTTGAGCAGGCATCTCTTAGACAATTATATAAAGTGAAGATGGAAGAACTGCGAGCTGAAAGCCAGCAGATTTCTGATTCATCTGGGACAATTGGACGCTCAAAAGGAGCTTCAGTAGCTTCTTCTCAGCAACAAATATCTGTCACTGTTGTGACAGAGTTTGTGCGTTGGAATGAAGAAGCAATCTCGAGATGCAATCTCTTCTCTTCCCAGCCTGCTACACTTGCAACCCATGTAAAAGCAGTGTTTACATGCCTGCTAGACCAAGTTAGCCAATATATCGCAGATGGGCTTGAACGAGCTAGGGACAGCCTGACTGAAGCGGCTAATTTGAGGGAAAGATTTGTGCTGGGTACAAGTGTTAGCCGTAGAGTGGCTGCTGCAGCTGCATCTGCTGCAGAGGCTGCTGCTGCTGCTGGTGAAAGCAGTTTCAGATCTTTCATGGTTGCTGTACAACGTTCTGGAAGCAGTGTAGCTATTATTCAACAATACTTTGCAAATTCTATATCTCGGCTTTTGCTCCCTGTGGATGGTGCACATGCTGCTTCTTGTGAAGAAATGGCTACAGCCATGTCCAGTGCAGAGGCTGCTGCTTACAAAGGACTACAACAGTGTATTGAAACTGTCATGGCTGAGGTAGAGCGATTGCTTTCAGCTGAGCAAAAGGCTACAGATTATCGATCACCTGATGATGGAATGGCTCCTGACCACCGACCAACCACTGCCTGCACAAGGGTTGTGGCTTATCTTTCTCGTGTGCTGGAGTCTGCATTCACTGCTCTAGAAGGTCTTAACAAACAAGCATTCCTGACCGAGTTGGTATGA 2199 0.4602 MREPRDGTTKTDNRTTKSASSPASFPLILDIDDFKGDFSFDALFGNLVNELLPSFKLEEAESDGGDSLPNGHLRAPSADAIKFSQGVSSPLFPEVEKLLSLFKDSCKELLELRKQIDGRLYNLKKDVSVQDSKHRKTLSELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADAQRETASQTIELIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAQKLRSFAEEDIGRHGIAVPSAVGNATASRGLEVAVANLQDYCNELENRLLSRFDAASQKRELTTMAECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADTRLVLGEQAAQASPSNVARGLSSLYKEITDTVRKEAATITAVFPSPSEVMSILVQRVLEQRVTGLLDKLLVKPSLVNLPSMEEGGLLLYLRMLAVAYEKTQELARDLRAVGCGDLDVEGLTESLFSTHKDEYPEFEQASLRQLYKVKMEELRAESQQISDSSGTIGRSKGASVASSQQQISVTVVTEFVRWNEEAISRCNLFSSQPATLATHVKAVFTCLLDQVSQYIADGLERARDSLTEAANLRERFVLGTSVSRRVAAAAASAAEAAAAAGESSFRSFMVAVQRSGSSVAIIQQYFANSISRLLLPVDGAHAASCEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKATDYRSPDDGMAPDHRPTTACTRVVAYLSRVLESAFTALEGLNKQAFLTELV. 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11571 732 Coils Coil 251 271 - -
Seca4g11571 732 Pfam Exocyst complex component Sec10 493 731 IPR009976 GO:0005737
Seca4g11571 732 Pfam Exocyst complex component Sec10 146 483 IPR009976 GO:0005737
Seca4g11571 732 MobiDBLite consensus disorder prediction 1 22 - -
Seca4g11571 732 PANTHER SEC10 27 731 IPR009976 GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11571 Seca-Chr4 255410062 255420908 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11571 K19984 - gmx:100820430 1275.38