Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11451 ATGGAGAATCTGATACAGTTGGTGAACAAAATACAGAGGGCGTGCACCGCCCTCGGCGATCACGGTGAGGAGAGCGCCTTGCCTACTCTCTGGGACGCCCTTCCCTCCATCGCCGTCGTCGGAGGACAGAGCTCTGGAAAATCTTCAGTGTTGGAGAGTATTGTTGGAAAAGATTTTTTACCTCGTGGATCTGGGATTGTTACTCGGCGTCCTCTTGTTTTGCAGCTTCATAAGATTGAAGACGGGGCGAGAGAATATGCTGAATTTATGCACCTTCCAAGGAAGAGATTTACTGATTTTGCTGCTGTTAGGCAGGAGATCGCTGATGAGACTGATAGAGAAACAGGTCGCTCCAAGGGTATTTCATCTGTTCCCATCCATCTGAGTATCTACTCCCCTCATGGTGAGATATAA 414 0.4855 MENLIQLVNKIQRACTALGDHGEESALPTLWDALPSIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKIEDGAREYAEFMHLPRKRFTDFAAVRQEIADETDRETGRSKGISSVPIHLSIYSPHGEI. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11451 137 PRINTS Dynamin signature 59 76 IPR022812 -
Seca4g11451 137 PRINTS Dynamin signature 34 52 IPR022812 -
Seca4g11451 137 Gene3D - 1 136 IPR027417 -
Seca4g11451 137 Pfam Dynamin family 37 134 IPR045063 -
Seca4g11451 137 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 60 69 IPR019762 -
Seca4g11451 137 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 31 137 IPR030381 GO:0005525
Seca4g11451 137 SMART dynamin_3 1 136 IPR001401 GO:0003924|GO:0005525
Seca4g11451 137 PANTHER DYNAMIN 2 134 IPR022812 -
Seca4g11451 137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 136 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11451 Seca-Chr4 253645299 253646535 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11451 - - vum:124838290 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11451 4 253645299 253646535 Seca4g11451 4 253645299 253646535 ECH