Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11438 ATGGGAGAACATGAGGGGTGGGCACAGCCACCAAGTGGGCTATTACCAAATGGCTTGTTGCCCGATGAAGCCGCCTCTGTGATACAGATGCTTGACTCAGAGCGATGGTTGAAAGCTGAACAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCCACCCTCCGAGGAGCGCCGAAATGCAGTTGCAGACTATGTCCAGAGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCAGTTCCCCTCAAAACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATTTGAAGGATACATGGGCACATCAGGTTCGCGACATGCTGGAGAATGAGGAGAAGAATGAGAATGCAGAGTTTCATGTCAAGGAGGTTCAATACATCCAGGCCGAATGGAATTTTAGAATTAGTCTTTTACATGCTTTTCCTTCATATTTGCAGGTAAAGATTATAAAGTGTCTCGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGGTTATGCACCCTTTGTTTTCTTGAGGAGGTTGATAATCTAATTAACCAAAATCATTTATTCAAGCGTAGCATTATACTGATAAAAGCTTGGTGTTACTACGAGAGCCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTATGCATTAGAAACCTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCACTTGAGGTATTGTATCGATTTTTGGAGTTTTTTAGTAAGTTTGACTGGGATAATTTCTGTGTAAGTCTGTGGGGTCCAGTTCCCATTAGTTCACTCCCAGATGTGACAGAACCTCCTCGAAAAGATGGTGGAGATTTACTGCTCAGCAAGTTATTTCTTGATGCTTGTAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCGTTTGTTTCCAAGCACTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGCCGTAGTGTCAGCAAAGGTAATTTCTATAGGATACGCAGTGCCTTCGCATTTGGGGCTAAAAAGCTGGCTAGATTGCTTGATTGTCCAGAGGAAGATTTGTATCTTGAAGTCAATCAGTTCTTTTTGAACACCTGGGACAGACATGGAAGTGGGCAACGACCTGATGTTCCAAGTAATGACTTATGGCGTTTGAGGTTATCTAGTCATGACCAAATACAGAGATCTGAGAATCCCAGGAACAATAACCATAAAATTGATAATACCTCCAATCGGGAATTTCATGTTGAAGGGGAACAGGTTTCACATAGTAGCCTGTCTCAGCATAGTAATTTATCATCAGAAAACTCATCCAAAAATAGTGATGTTTCTACAGTGTCACATACTCAGAGTCAAAAGAGTTATGGAAATCAAAATAATTCGAGGACCTTCGATCAAGTTCAAAGGGATGTTAATTCTAATCAAGGTCCTCATGTTGATAAAGGTCAGAGAAATGTTAAATCCAATAACCTAGTGAATAATGTTCAGGGAAGGTTTCTATTTGCCCGGACACGTTCTAGCCCTGAACTAACTGACTCGTATGGAGGAGTTTCTTCCCAAGGAAGGCGTACTAAAGCACCAGAAGGTGGTAAAGGTCAGAATTCCCTTTTGAAGTTGGAGAATAGTCGTAGAAAGAATTTTGAACCTGATGTAGCTGCAAGGATTGATGACTCATCTGCTAGGCACATCTCGTCTGGTCAAGTTCTTGGTAGTGCTGCTGATTCAAACATTAATCATGATGAATCAGGCTCTGGTGTCACGGGTGAAGAGTTTGCACCTGTTGCTGGTGCAAGTGGAATGCAGATGATGAATCAGGAGGAGCAAGACCTTCTGAATATGATGACATCTCCCACAGCTCAAGGTTTCAGTGCTCAGGCTCATGTTCCAATGAATTTAGCTCCAGGTCACCTACCATTCCCCTTTCCACCTTCCATTCTTGCATCAATGGGATATGCTCAGAGAAATATGGGTAACATTCCCTTTATTGAGGCTCCTTGGGGTACAAATATGCAATTTCCTCATGGTTTAATCCCTTCACCATTGTCTCCATATTTCCCTGGCATGGGGTTGACTTCAAATCCTCAAGATTTAATTGAAACTGGCAATGAGAATTTCAATTCTGTTGAAATGAACATAGCAGAAGCCGATAGTGATTTCTGGCATGAGCAAGAAAGGGGTTCTGCTAGTGGGGTTGAAGTTGATAATGGAAATTTTGAAATGCTTTCAGATGATAAACAACAGTCAACTTCAGGTAGTTACAACATTATCCCATCTTCTCGGGTTGGCAGCTCTAGTAGTTCTGGCAGAACTCAGCAGAAGTTTACTAAAGAAAACCGAGGATCACCAAGAGAAGAACATATTGATAATTTTCATTATCAAGATGGGCGAAGAAATGAGGTTTATTTTGATGATAGAATAGCAAATTCTGAGTTACCCAGTGCACCACCACCTTCAAGCTCCTTCAGGAATAAGAGCTCTTCTGAAAGCTCTTGGGAAGGATTGTCAACCAAATCCTCAAAATCAGCAAGGGAGAGAAAGGGGAAGAAAACTACTCCCTCAGTGACATCTGCTGTTTACGGGAAAGGTAAAAATGCCTCAGAAATTTCATCTAACCGAATAGATGATGAAAACAGAGAGTGGACTATGGCATCTGATATGCCAGAAAGAAGCACTGGGCCTGCAACTGGTACCTTCACACATGTTCCACGGAATCAAATATCCAGTTTTGAAACTGCTCAGACAAGTGGATCAGATTCTCCATTACCCATAGCTCCTGTGCTTTTAGGTCCTGGTTCTCGCCAAAGAGCAAATGATAATTCTGGAGTTGTTCCATTTGCATTCTATCCTACAGGGCCACCAGTACCTTTTGTTACAATGCTTCCTTTATATAATTTTCCAACTGAGTCTTCTGACACATCAACAAGCAACTTCAATGTGGAAGAAGGGGCAGATAACAGTGATCCTGGTATGAATTTTGATTCATCTGAGGGGTATGACCACTCTGAGGTGTCAAGCCCTTCCAATTCTATGTCAAGGGCGGCTATTGAGTCATCAGAGCACAAGGCTGACATTCTTAATAGTGACTTTGTTAGCCACTGGCAAAATTTACAATATGGGCGATTTTGTCAAAACTCACGTTATCCTCCTTCTATGATCTATCCTTCACCTGTTATGGTTCCTCCTGTTTATTTGCAGGGTAGGCATCCTTGGGATGGTCCTGGAAGACCTCTTTCAGCCAACACGAATCTTTTCACTCAGCTCATGAGCTATGGGCCACGTCTTGTTCCTGTGGCTCCACTCCAGTCAGTTTCTAATAGACCTGCAAACATTTACCAACGTTTCGTAGATGATATGCCACGATATAGAAGTGGGACTGGAACCTACCTGCCAAATCCGAAGGTTTCTGTACAGGATCGCCATTCGTCAAATTCTAGAAGGGGAAATTACATCTATGATAGAAGTGACCATCATGGTGATAGAGAAGGAAATTGGAATTTGAACTCGAAGGTTCGAGGAACTGGGCGTGGCCATAATCGCAACCAGGTTGATAAGGCCAGTTCAAAACCAGAGCGGATGGCAACTAGTGAGAGCCGTGCTGAGAGATCATGGGGTGCGCATAGACATGACTCCTTCATTTCACACCAGAATGGTCCAGTCCGCCCAAATTCCTCACCGAACAATCCTTCCAATGTAGCTTATGGAATGTACTCTATACCAGGCTTGAACCCAAGTGGAGTCTCATCAAATGGACCGGCAATGCCACCTGTTGTAATGTTGTATCCCTATGATCATAATGCTGCCTACGGTTCACCGGCAGAGCAACTTGAGTTTGGGTCTTTGGGACCAATGGGTTTCCAAGGTGTCAATGAACCGAATGAGGGAAGTCGATCTGGCGGAGCACTTGAAGAGCAAAGGTTTCATGGTGGCCCTGCTCAACGAGCCTCACCTGATCAACCCTCTTCACCCCATGTCTCAAGGGGCCCCTGA 4041 0.4323 MGEHEGWAQPPSGLLPNGLLPDEAASVIQMLDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDTWAHQVRDMLENEEKNENAEFHVKEVQYIQAEWNFRISLLHAFPSYLQVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFYRIRSAFAFGAKKLARLLDCPEEDLYLEVNQFFLNTWDRHGSGQRPDVPSNDLWRLRLSSHDQIQRSENPRNNNHKIDNTSNREFHVEGEQVSHSSLSQHSNLSSENSSKNSDVSTVSHTQSQKSYGNQNNSRTFDQVQRDVNSNQGPHVDKGQRNVKSNNLVNNVQGRFLFARTRSSPELTDSYGGVSSQGRRTKAPEGGKGQNSLLKLENSRRKNFEPDVAARIDDSSARHISSGQVLGSAADSNINHDESGSGVTGEEFAPVAGASGMQMMNQEEQDLLNMMTSPTAQGFSAQAHVPMNLAPGHLPFPFPPSILASMGYAQRNMGNIPFIEAPWGTNMQFPHGLIPSPLSPYFPGMGLTSNPQDLIETGNENFNSVEMNIAEADSDFWHEQERGSASGVEVDNGNFEMLSDDKQQSTSGSYNIIPSSRVGSSSSSGRTQQKFTKENRGSPREEHIDNFHYQDGRRNEVYFDDRIANSELPSAPPPSSSFRNKSSSESSWEGLSTKSSKSARERKGKKTTPSVTSAVYGKGKNASEISSNRIDDENREWTMASDMPERSTGPATGTFTHVPRNQISSFETAQTSGSDSPLPIAPVLLGPGSRQRANDNSGVVPFAFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNVEEGADNSDPGMNFDSSEGYDHSEVSSPSNSMSRAAIESSEHKADILNSDFVSHWQNLQYGRFCQNSRYPPSMIYPSPVMVPPVYLQGRHPWDGPGRPLSANTNLFTQLMSYGPRLVPVAPLQSVSNRPANIYQRFVDDMPRYRSGTGTYLPNPKVSVQDRHSSNSRRGNYIYDRSDHHGDREGNWNLNSKVRGTGRGHNRNQVDKASSKPERMATSESRAERSWGAHRHDSFISHQNGPVRPNSSPNNPSNVAYGMYSIPGLNPSGVSSNGPAMPPVVMLYPYDHNAAYGSPAEQLEFGSLGPMGFQGVNEPNEGSRSGGALEEQRFHGGPAQRASPDQPSSPHVSRGP. 1347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11438 1346 MobiDBLite consensus disorder prediction 524 538 - -
Seca4g11438 1346 FunFam PAP/OAS1 substrate-binding domain superfamily 178 373 - -
Seca4g11438 1346 Gene3D - 178 371 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 987 1026 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 1332 1346 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 1163 1182 - -
Seca4g11438 1346 CDD NT_PAP_TUTase 59 182 - -
Seca4g11438 1346 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 17 1341 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 1194 1226 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 759 793 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 433 509 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 869 885 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 524 554 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 438 509 - -
Seca4g11438 1346 SUPERFAMILY Nucleotidyltransferase 29 217 IPR043519 -
Seca4g11438 1346 SUPERFAMILY PAP/OAS1 substrate-binding domain 198 367 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 1301 1346 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 826 896 - -
Seca4g11438 1346 Gene3D Beta Polymerase, domain 2 52 177 IPR043519 -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 759 814 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 1140 1246 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 1146 1162 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 830 855 - -
Seca4g11438 1346 MobiDBLite consensus disorder prediction 794 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11438 Seca-Chr4 253433252 253442266 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11438 - - gmx:100809742 2193.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11438 4 253433252 253442266 Seca4g11438 4 253433252 253442266 ECH