Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11405 ATGAAGGCAGCTCCACGACTCCTCTTCATAATTATTTTTGTTGGTTCATTCTTCCTTGCAAGGCCAGAAGCTGACTCGTGTACCAGCAATCTAAACCTCAGAGTTCCCATCCTTTTTGACACAACTAACCTTCACTGCCTTTCTGTTTGGGATGCTCAAGGTTTCATCCTCAGATATGTTCAGACTTCTGCAAATGTTTGGAGCTTCATTCTCTCAACCCCAGACACAAATTCTTACATAGCTATGGGGTTCTCGGCTAGCGGTGGCATGGTGGGTTCAAGTGCCATTGTGGGGTGGGTGGCATCCAGAGGAGCCAGTGGAGGGATAAAGCAGTATTATCTAGGAGGGCTTACACCAAATCAGGTGGTGCCTGATAAAGGCAACCTACAAGTTATTGCTAATTCAACCTTCATCACTTTACAGTCCTCACGTCTGTACATGGTGTTTCAGTTAGAAACTACCGAACCTTTGTCCTGGCTGATACTTGCCACTGGATCCACCGGTATATTCCCTGCAGCACCAAGTTATGAACTAACAAAACACCTAGACAAGGTTTCCACAAGAATAGACTACTCAAAAGTTTGTTTCCTTGCTTCAGCTAACCTTGGAAGTTCACAAGTCAATGGAAGTTCTCCACAAGTAGATGGAAGTAGTTCACAAGCAGACTCCTGTGACTCAAACCTAAACCTCAGTGTTCCACTCCTCTTTGACACAACCAAGCTCAATTGCCTCCCTGTTTGGAATGCTCAAGGGTACATCCTTAGATATTCTCAAACTTCTCCAAACATATGGAGCTTCATTCTGTCAGCCCCAAATCCAAATTCTTATATAGCAATGGGGTTCTCTCCTAATGGAGGCATGGTGGGTTCAAGTGCTATTGTGGGGTGGATCTCATCCAATGGAGCAAGTGGAGGGTTGAAGCAGTATTATCTAGCAGGGGTTGCACCAAACCAGGTGGTGCCAGATAGAGGCAACTTAAACATTCTCCCCAACTCAACCTTTATTACATCACAGTCCTCACGTTTGTACATGGCCTTCCAGTTAGAAACCAATCACCCTCTGTCCCGGTTGGTTTATGCTATTGGACCCAATGGTATCTTCCCTTCAGCACCAAGTTTTGCACTAACGCTGCATCAAGACAAAATTTCTGTTACGTTGAATTATGCAACAGAATCAGGGATGTCATTAATTAACAAGGTTTGTTTATCATTAATTTTATTTGAAACAGGTTCAAGTGCATCGGAAAACCCATATACGAACCTGAAAAGAAGTCATGGATTGTTGAATATATTGGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGCTCGCCACTTCAAGCAATGGGATCCATTTTGGTTTTATTTCCATGCTTCAGTTCAATCATTGGGTTTTCTTCTTGGAGTAATCGGTGTAATTAGTGGGCTTGTCCTCAGTAATCAACTCCATATTGACCTTAATCTTCACAAGGCTCTTGGAATAATTATTCTTGTACTCGGTTGCCTCCAGATAATGGCTTTCCTTGCTCGACCAAAGAAGAATTCAAAAGGGAGAAAGTATTGGAATTTATACCATCATAACATAGGAAGAATATTGATTATAGTAGCCATAGCTAATATTTTCTACGGAATCCGTTTAGGAAAGGAAGGAAGTGGATGGACGGTAGGTTATGGAATTGTTCTTGCTGTATTACTCTCTATTGCAGTCTTTTTTGAGATTGGACTGTGGAATAGAGACTAA 1743 0.4234 MKAAPRLLFIIIFVGSFFLARPEADSCTSNLNLRVPILFDTTNLHCLSVWDAQGFILRYVQTSANVWSFILSTPDTNSYIAMGFSASGGMVGSSAIVGWVASRGASGGIKQYYLGGLTPNQVVPDKGNLQVIANSTFITLQSSRLYMVFQLETTEPLSWLILATGSTGIFPAAPSYELTKHLDKVSTRIDYSKVCFLASANLGSSQVNGSSPQVDGSSSQADSCDSNLNLSVPLLFDTTKLNCLPVWNAQGYILRYSQTSPNIWSFILSAPNPNSYIAMGFSPNGGMVGSSAIVGWISSNGASGGLKQYYLAGVAPNQVVPDRGNLNILPNSTFITSQSSRLYMAFQLETNHPLSRLVYAIGPNGIFPSAPSFALTLHQDKISVTLNYATESGMSLINKVCLSLILFETGSSASENPYTNLKRSHGLLNILGWGILIIMGAIVARHFKQWDPFWFYFHASVQSLGFLLGVIGVISGLVLSNQLHIDLNLHKALGIIILVLGCLQIMAFLARPKKNSKGRKYWNLYHHNIGRILIIVAIANIFYGIRLGKEGSGWTVGYGIVLAVLLSIAVFFEIGLWNRD. 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11405 580 CDD DOMON_DOH 45 146 IPR045266 -
Seca4g11405 580 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Seca4g11405 580 Gene3D - 384 577 - -
Seca4g11405 580 SMART DOMON_3 276 362 IPR005018 -
Seca4g11405 580 SMART DOMON_3 79 165 IPR005018 -
Seca4g11405 580 CDD DOMON_DOH 250 383 IPR045266 -
Seca4g11405 580 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 8 192 - -
Seca4g11405 580 SMART 561_7 424 545 IPR006593 -
Seca4g11405 580 CDD Cyt_b561_FRRS1_like 414 574 - -
Seca4g11405 580 Pfam Eukaryotic cytochrome b561 425 545 IPR006593 -
Seca4g11405 580 ProSiteProfiles DOMON domain profile. 250 362 IPR005018 -
Seca4g11405 580 ProSiteProfiles Cytochrome b561 domain profile. 388 580 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11405 Seca-Chr4 252977840 252984224 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11405 - - gmx:100804791 917.916