Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11404 ATGTTGACTCAAGCTCCTCTTCCATGGCTATTGCTGGCTCTCGCCGTCGTTGTGTTGACGGGAACAGCTCCAGCACGTGCCACGGTGGAGTTGGAGCGAGTAGGAGGAAGGCGTCAGAGAGAGTTTGACTATTTCGCGCTGGCGTTGCAATGGCCTGGAACTTATTGCCAACGCTCCAAAAGTTGCTGTCCCTCTAATGCTTGCTGCAGAGGCAACGATGCTCCGACAGTATTCACCATACGTGAAAGTTGCATTGACTGTGTTCTGAGTCAATTTCCTACTTCTGAGGTGTGGAATGCTTGCTCCATCTTGAAAACTATCATTATATCTACTTGTATAATAGATGGACTCTGGCCTGACTATAATGATGGAACATGGCCAGCCTGTTGCTCTAAATCTCAGTTCGATCCAAACGAGATATCAACATTGACTGATGCTCTAGAGCAATATTGGCCATCACTGAGCTGTAGCAAACCAAAAACATGCCGTGGTGGAAAAGGTTCATTTTGGGCTCACGAGGTGTCACAAAATTTTCTTTTCTGTTATTTTGTTAGAGAAAAATCTCATGGCTTTCTTGTACTTGTATTCCAATTTTCTGATCTTGCAATTTCACTTGCAGAGAAGCATGGCACATGTGCATATCCTGTGATTCGAAATGAATATGATTATTTCCTGATAACGCTGAATGTCTATTTCAAATATAATGTCACAAGAGTTCTAAATGAGGCTGGATATGTTCCATCAAATACAGAAAAGTATCCCCTTGGAGGCATCATCTCTGCCATTGAGAATGCGTTCCATGCATCTCCTTTAATAGTTTGCTCAAAAGATGCTGTGGAGGAACTTCGGCTATGCTTCTATAAGGACTTCAAGCCACGTGATTGTGCTGTTGGACCAGACCTTACTTCAAAAGGATCATGTCCCAAATATGTTAGCTTGCCAGAACTTGTATCATTAAAAGTCTGGGATTCTAAGGGCGTGATGGGCTTCAAAGTTGGGTGTCTGATGACGCAGCTCTTTAAGGTTATGGTAGAGTGCCTCTGTTCTGTACATTTATGTACCTTGCGAATAAACAAAGCCACATGCATAAATTTGTATGGATATTGTACCATTTATCAATTTGGAGACAAATGGATAAAGTGA 1143 0.4243 MLTQAPLPWLLLALAVVVLTGTAPARATVELERVGGRRQREFDYFALALQWPGTYCQRSKSCCPSNACCRGNDAPTVFTIRESCIDCVLSQFPTSEVWNACSILKTIIISTCIIDGLWPDYNDGTWPACCSKSQFDPNEISTLTDALEQYWPSLSCSKPKTCRGGKGSFWAHEVSQNFLFCYFVREKSHGFLVLVFQFSDLAISLAEKHGTCAYPVIRNEYDYFLITLNVYFKYNVTRVLNEAGYVPSNTEKYPLGGIISAIENAFHASPLIVCSKDAVEELRLCFYKDFKPRDCAVGPDLTSKGSCPKYVSLPELVSLKVWDSKGVMGFKVGCLMTQLFKVMVECLCSVHLCTLRINKATCINLYGYCTIYQFGDKWIK. 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11404 380 SUPERFAMILY Ribonuclease Rh-like 41 173 IPR036430 GO:0003723|GO:0033897
Seca4g11404 380 CDD RNase_T2_euk 42 309 IPR033697 -
Seca4g11404 380 PANTHER RIBONUCLEASE T2 35 309 IPR001568 GO:0003723|GO:0033897
Seca4g11404 380 Gene3D - 92 318 IPR036430 GO:0003723|GO:0033897
Seca4g11404 380 SUPERFAMILY Ribonuclease Rh-like 207 314 IPR036430 GO:0003723|GO:0033897
Seca4g11404 380 Gene3D - 38 84 IPR036430 GO:0003723|GO:0033897
Seca4g11404 380 Pfam Ribonuclease T2 family 207 295 IPR001568 GO:0003723|GO:0033897
Seca4g11404 380 Pfam Ribonuclease T2 family 42 173 IPR001568 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11404 Seca-Chr4 252971398 252977189 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11404 K01166 - gmx:100815624 372.859