Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11383 ATGATTGGAGAGTCTAGTCACAGCCTTGCAACATCCACAGAGTTACTTAAGGTACTCAACCGTATCTGGAGTCTTGAAGAACAACATTCATCCAATATATCAGCAGTGAAAGCCTTAAAAATGGAACTAGTTCACTCCCAGGCACGGATGAAGGTGTTACTACGAGAAAAGCAAATAAATAGGCAAGAAATGGAGAACTTAATGGAACAAATGACAGTGGAAAAACTTGTTAGGAAGAATAAAGAACATGATAGAATTAAGGCTGCTGTTCAATCAGTCAAGGATGAGCTAGAAGATGAGAGGAGGCTACGAAAGCATTCAGAAAGCTTGCATCGGAAGCTGGCCAGGGAGCTTTCTGAAGTAAAGTCTTCATTCTCTGGTTGTTTAAAAAATCTTGAGAGAGAGAGAAAAGCACGGATCCTTTTGGAGAATTTATGTGATGAATTTGCCAAAGGAATCAGAGATTATGAACAAGAAGTACATTCTCTTAGGCGGAATTCTGAGAAGGGTCAGGTTAAAGGGAATAGCCTTGATAGGCTAATACTTCATATTTCAGAAGCTTGGCTTGATGAGCGCATGCAAATGAAGCTAGCTCAACCTGACAGTGATCTCATAGATAGAATGTCAATTGTTGACAAGTTAGGTTTTGATATTGAAACATTTCTTCATGCAAAACGATCTGTTGATTTGAAAAAATATGGTTACTCCTCCCCAAAGGAGCTCAGGGAAATATACCCTTGTCAGCATTCAGTGGATTCCTTTCCACTACAAGAGGATGTAAGTCCACCTCACAACATGGCTCAGGAAGATTCCATTGATACTGACTTTTCTGAACCAAAAAGGGGTGTTGGTGAAGCACTCCACAACCTCAGCTCCAGACTGCAAATAAACAATACTACTGAGGTTCATCAAGAAAAGAAAGGCAGCCAAAATTCCAAGAGGAAACAAGTTATGTCAAAGGAAATCACTGAGGACTGTCAGTTGCAAACAAACATGGAGAGGAACATGCCATGTGATGATAATGAGAGTTGCTTTGTGGAGAGGAAATCAAGTGAAATGGGAGAAGATAGCACAGCTCTATTAAATGAAGACACCAAACAAGATCCACAAGAAAGTGATAGACCCTGGACCCAGAGAATGAACTCAAATCACAGGTCAGATAACAATCTAGTTGGAAACAGTTCCTTGTCATCAGAAGGTGATAAGGTTTATCCTGAGAGTATTTGCAGGGAAGATTCTTGTGTCCAATCTGCAGTTACAGCTAATGGTAGTAGTCCTGTAAAACTGTGGAAGTCAAAGTTGCCTGCCTCAGATTTTGACAAGTCTGAGTCTTCTACCAAATTGCCTAAGGGAGTGAAGGAAAACACATTGATGGCAAAATTGCTTGAAGCAAGATTAGAGGGACAGAAATCTCGCTCCAGAGCAAGCAAAAGCACTTCTTGA 1443 0.4054 MIGESSHSLATSTELLKVLNRIWSLEEQHSSNISAVKALKMELVHSQARMKVLLREKQINRQEMENLMEQMTVEKLVRKNKEHDRIKAAVQSVKDELEDERRLRKHSESLHRKLARELSEVKSSFSGCLKNLERERKARILLENLCDEFAKGIRDYEQEVHSLRRNSEKGQVKGNSLDRLILHISEAWLDERMQMKLAQPDSDLIDRMSIVDKLGFDIETFLHAKRSVDLKKYGYSSPKELREIYPCQHSVDSFPLQEDVSPPHNMAQEDSIDTDFSEPKRGVGEALHNLSSRLQINNTTEVHQEKKGSQNSKRKQVMSKEITEDCQLQTNMERNMPCDDNESCFVERKSSEMGEDSTALLNEDTKQDPQESDRPWTQRMNSNHRSDNNLVGNSSLSSEGDKVYPESICREDSCVQSAVTANGSSPVKLWKSKLPASDFDKSESSTKLPKGVKENTLMAKLLEARLEGQKSRSRASKSTS. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11383 480 MobiDBLite consensus disorder prediction 348 402 - -
Seca4g11383 480 MobiDBLite consensus disorder prediction 374 401 - -
Seca4g11383 480 Coils Coil 76 103 - -
Seca4g11383 480 Coils Coil 146 173 - -
Seca4g11383 480 MobiDBLite consensus disorder prediction 348 373 - -
Seca4g11383 480 MobiDBLite consensus disorder prediction 306 320 - -
Seca4g11383 480 PANTHER GB|AAF24581.1 3 475 IPR043424 -
Seca4g11383 480 Coils Coil 50 74 - -
Seca4g11383 480 MobiDBLite consensus disorder prediction 295 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11383 Seca-Chr4 252676282 252680364 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11383 - - gmx:100805864 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11383 4 252676282 252680364 Seca4g11383 4 252676282 252680364 ECH
Seca2g05522 2 141671506 141676606 Seca4g11383 4 252676282 252680364 PCT