Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11381 ATGATGCCTGCATACAGAAGCATGGACTCATACCCATATCAGAGAAACCAAATACCATACTCTCATTGTTATCATCCTGGCATTGAGGCTGTTCCCCCTCAAATAAGGGCAGACCCATCCAAACCACCCTTTTCTTATGAACAATTTTGGCCCTATGCTGGCAGTTATGGTCACCCTATGCCGGCACATTTCTGCTGTGGCCACAACAACTTCCCTGGTTATTATAGCTACAGGCCTTCTTATCCTCATGGTCCTGCTCCATCACCAATATACTGTTCTGGAGGTTGTCCTGCATATGCTGAACCATTTTTTGTTCCTTATTCCCCACAACCACATTATTCTATGGAGCTGCCTAGATATGAATATGATAAACATATGCCCAGAGACCATCATTGTTGTGGGTGTCCTAATCATCCATGCAACCAAAAGGAAGAAAAAAGTGTGAAGATTGAAGAGCATGAACCAGATGCTGGAAAGAAAGTGAATGATGCTGTTTTTCCTATCCAGTTGAGGAATTATCCATATCCCTTGATTTGGATTCCACCAGAGTACACAAGTAACAGACAGCTGAAAAATCCTACTACAGCTGAGGTGGGTGAGCAACAAGACAACATATCACATGATACAAAGCTTAATGCTGATGCACAGGCAGCACAGGAGCCAAGAGCCTGGAATGAATGGTTACCCTTTTATATGAAGGGTGCCCCAAACATGGTTCATGATGGAGATGGAATAAAAAGCCAGAACTATGAGACTGACAATAAAAGAAGGGAATTTGAAGATGGAAGACTGAACCAGAAACACCAGAGGGAACACAAGAAATCTGAATTGCCATTCCCTATCATCTGGCTGCCTTACTACAAAAAGCAGGAGGAAGGTGAAAAAACAAACAAACAAGATAGCACTTCCACACCAAAATTCATTGAGGAGGCACCTCATACATTTAAATCTGTTCCAGTGAAGTCTTATGTTGATGAAGGTGTTATGAACGGGACCAGATCAAATCAAACTGAATCCACATATACAAATGCTTCGGATGTTACAGAGAAAGTGACTAATGAAAGAAACATCCCTGTGAAGCAGATGGAATCACATCAAGATAAAAATTACCCAGAAGGAAATCACAAGAGAGAAATGGATGTTTCTGTAAATCAAAAGGAAGAAAATGTGATCAAAGAAGGCTCCCACACCAGTGGTAAAAGGCAACCTACATCTCCACCAAAAGCATCCAAGTTGCCACCTGTGTGTCTGAGAGTTGATCCACTACCAAGGAAGAAAAATGGTAATGGGAGTTCAAGGTCCCCAAGTCCACCTGCCTCAAAGGAACATTCCCAAGCAACAGCTGGTGAAGCATCCATGACTCCTTCATGTGGCATGAATAACAAGGCTCAACCAAATTCAAAACTTCAGAATTCAAACACCAATGAGAAAGTTAAACCAGAAGAGAGAATCATTAAGGTATCTGAAAATAAGACTAGTGAAAACAAGGGTGCTGAATCCAAGGATGAAAGTCAGAGCCAAATGAGCATTCCCAGTGGAGTTTCACAAGGGACAAAGGAAAGCTATACAGATAGTGACAAATGTAAGACTGAAGATAAAAAGGAAGAGAAAGGGGCAGAAAATATGGTGGAAGAAGCTACTGAAGTAAAGGAAGTAAAGGATTCAACTACGCCAACTAATGGAGGTCAAAAAGAGGGAAGAGTTTTATCAAATAGAGATGCTGCTGTTTTGATTCAAGCTGCTTATCGAGGATATCAAGTCAGAAAATGGGAACCATTGAAGAAAATAAAGCAGATAGCTGAAGTCAGTAAGGAGGTGACCGATATTAGAGGCCATATTCAAGTTCTTGAGGACTCTTCTGATCTTCAAAATGATGACAAGCAAAAAATTGCAATTGGAGAGACCATAATTAGACTCCTGCTAAAGTTGGATACTATACAGGGTTTGCATCCAAGTTTCAGGGAGATCAGAAAATCCCTGGCGAGAGAGCTTGTAACCTTGCAAGAAAGGCTTGATTCTATAATGGCTAAGAAACCTCAGCAGCAGATGCAGGAGCTTGTTGTTCAGAAACCTGTTGAAGTCACTCCACTGAATACGCAAAATGGAGAAAATCAGCAAAAACGACAAGAAGAAGAAATTGCAGTGCCGGGAGATACATTTGAAGGGATTAGTGATGGAAATCACAATACATTGGAGAAATATCAGGATCAGTTTTGCATGAAGGAGGGCATCAAGAATATTCATCCTAATAATGGTAGAAGTGAATCTCAGTCAGCAGTTGATCCAGCATCAAATGAGGGAACAGAGCATACTAATGAATTAGTTAATGAGGATATCAATCAAGTGGTTACAGTTGATGCATTAAATTGCACAAATGATCTTTCTGAAACTGACAAAATGGCTGGGGAACCCGAAGCAAAATCAGAAGTGAACGACATTCCTGTTGAAGTTGATAAATGTGATATGGTTGCTATGGAAGAATTGCCTGTGGGAGTTATTGATGAAGAGATCATTGATGTTCCTTCTGGGAAGGATAAACAAAATGAAAAAGGGACAAAAGAGGCCCAATCAACTGGATGTATGGATGGGAGTCTCCTAGCCATGGTGGATGATTCTGCATGTGATGATTCTGCATGTGATGAGTTAGATTCAGTAATCCATGCAATGATGGAGCTGCCAGTAGGAGTGCTTGATGATGATGAGGATAAGGCAACAGCTGAATATGGAAAGGATGATGAAATTAATGTTTGTAAAGGGGAAGTACAATCTGAAAATGAGGGATGTATTGAGGAGCTCCCAGTGGGACTGCTTGATGAGGATACATCAAAATCTGAATTGGAGAAGCATGATGAAACTAAGACATATGAAGAGGTTGTACCAGCTGAAGAAGAGGAATGTAATGCAGATGAGAGCACAATATCTTTCACAGATGACAATGAAAAAGTAACTCAACTAGAGCAGCCTGTGCTGGAAGAGAAGGAAGAGGTGCAGTCTAGTGGGGAGTCAGATGGATGGGTAAAGATTGAATTCCAGAAAGATGATGAACTCAAAGGGGATGCACTGCCAAATGTTGCAGAGGAAGTTGGAAATGAGACCAAGTTTCCATCTTTGACAACAGAAGCTAATGGTCATGAACTAGGGAATGAAGATGTATGCTTGGAAGCAAATGATGGAACTAACATGTTGGCAGAACCAATGGAGTTTGTGCCTATTAGTGACTTACAGAACGAAAAGGAACCAGAAGAAAAACCTGCACAAGTTGATGGCCAAGACATGGTTGCTGAACAGGTAATCAATGGTGATGATAAAGACAAGGAAGAAACCAAACTATCTTCTGCATTAACAGAGCTACCCGTTGGTGAGCATGATGAAGGGTTAAATGGTGATATGAAATTATTGGAAGAAAATGAGAAGTTAAGGAAGCTGATGAAGGAGTTGCTCGAAGCTGGAAATGAACAGTTAAGTGTTATATCTAATTTGACTGGCAGAGTGAAGGACTTGGAGAAGAAATTAGCTAAGAACAGGAAGAGTAAGAGAGTGAGGACAAAGCGCTATAGACCACCAACTTCCAAGGTGTCTCACATGTAA 3588 0.4094 MMPAYRSMDSYPYQRNQIPYSHCYHPGIEAVPPQIRADPSKPPFSYEQFWPYAGSYGHPMPAHFCCGHNNFPGYYSYRPSYPHGPAPSPIYCSGGCPAYAEPFFVPYSPQPHYSMELPRYEYDKHMPRDHHCCGCPNHPCNQKEEKSVKIEEHEPDAGKKVNDAVFPIQLRNYPYPLIWIPPEYTSNRQLKNPTTAEVGEQQDNISHDTKLNADAQAAQEPRAWNEWLPFYMKGAPNMVHDGDGIKSQNYETDNKRREFEDGRLNQKHQREHKKSELPFPIIWLPYYKKQEEGEKTNKQDSTSTPKFIEEAPHTFKSVPVKSYVDEGVMNGTRSNQTESTYTNASDVTEKVTNERNIPVKQMESHQDKNYPEGNHKREMDVSVNQKEENVIKEGSHTSGKRQPTSPPKASKLPPVCLRVDPLPRKKNGNGSSRSPSPPASKEHSQATAGEASMTPSCGMNNKAQPNSKLQNSNTNEKVKPEERIIKVSENKTSENKGAESKDESQSQMSIPSGVSQGTKESYTDSDKCKTEDKKEEKGAENMVEEATEVKEVKDSTTPTNGGQKEGRVLSNRDAAVLIQAAYRGYQVRKWEPLKKIKQIAEVSKEVTDIRGHIQVLEDSSDLQNDDKQKIAIGETIIRLLLKLDTIQGLHPSFREIRKSLARELVTLQERLDSIMAKKPQQQMQELVVQKPVEVTPLNTQNGENQQKRQEEEIAVPGDTFEGISDGNHNTLEKYQDQFCMKEGIKNIHPNNGRSESQSAVDPASNEGTEHTNELVNEDINQVVTVDALNCTNDLSETDKMAGEPEAKSEVNDIPVEVDKCDMVAMEELPVGVIDEEIIDVPSGKDKQNEKGTKEAQSTGCMDGSLLAMVDDSACDDSACDELDSVIHAMMELPVGVLDDDEDKATAEYGKDDEINVCKGEVQSENEGCIEELPVGLLDEDTSKSELEKHDETKTYEEVVPAEEEECNADESTISFTDDNEKVTQLEQPVLEEKEEVQSSGESDGWVKIEFQKDDELKGDALPNVAEEVGNETKFPSLTTEANGHELGNEDVCLEANDGTNMLAEPMEFVPISDLQNEKEPEEKPAQVDGQDMVAEQVINGDDKDKEETKLSSALTELPVGEHDEGLNGDMKLLEENEKLRKLMKELLEAGNEQLSVISNLTGRVKDLEKKLAKNRKSKRVRTKRYRPPTSKVSHM. 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11381 1195 MobiDBLite consensus disorder prediction 522 552 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 1168 1195 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 330 567 - -
Seca4g11381 1195 Pfam IQ calmodulin-binding motif 572 590 IPR000048 GO:0005515
Seca4g11381 1195 Coils Coil 657 677 - -
Seca4g11381 1195 SUPERFAMILY BAG domain 590 674 IPR036533 GO:0051087
Seca4g11381 1195 ProSiteProfiles IQ motif profile. 571 600 IPR000048 GO:0005515
Seca4g11381 1195 MobiDBLite consensus disorder prediction 502 521 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 745 775 - -
Seca4g11381 1195 Gene3D BAG domain 588 678 IPR036533 GO:0051087
Seca4g11381 1195 MobiDBLite consensus disorder prediction 1174 1195 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 360 395 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 293 313 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 475 501 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 749 775 - -
Seca4g11381 1195 FunFam BAG family molecular chaperone regulator 6 588 679 - -
Seca4g11381 1195 SMART BAG_1 598 675 IPR003103 GO:0051087
Seca4g11381 1195 MobiDBLite consensus disorder prediction 1027 1047 - -
Seca4g11381 1195 Pfam BAG domain 599 673 IPR003103 GO:0051087
Seca4g11381 1195 Gene3D - 558 587 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 427 474 - -
Seca4g11381 1195 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 926 1184 IPR040400 -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 249 273 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 1097 1111 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 935 980 - -
Seca4g11381 1195 Coils Coil 1157 1177 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 330 359 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 1075 1129 - -
Seca4g11381 1195 MobiDBLite consensus disorder prediction 936 960 - -
Seca4g11381 1195 Coils Coil 1129 1152 - -
Seca4g11381 1195 ProSiteProfiles BAG domain profile. 598 675 IPR003103 GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11381 Seca-Chr4 252625684 252629690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11381 - - gmx:102668563 1288.86