Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11369 ATGAAACGGTGCGTTTGCCCATTAGCTATGTTACTGCTTCTAATAGTAGTACTCATAGGTGTTGCGATACTCACCATGTTTCATGTCAAGGATCCCATTATGCAAATCAACAATGTCAAAGTCACAGAATTCAATCCTATCGGCAACACCACACTAATCGCAGATGTATCCATGAAAAACACAAACTTTGCATCCTTTGAGTATAGTAACACCACCACAACTCTGTACTACCGTGGCATCATGGTGGGAGAGGCAAGATGGCCACCAGGAAAAGCTAAGGCAAGGCACACATTAAGGATGAATACGACCATGAATTTGAAGGGCTCAGTCCCACATTGGTATGGCCTGAGTGCCCTCTATCTAAGGAACAACATGCTATCTGGAACAGTGCCGGTCAATATAGGCGACGAGATGTTAAATTTGTGGTACTTGGATCTTTCAAATAACCACCTGAATGGGAGCATACCGCTATCCATAAACAGAATTCAATATTTGAGGTATCTTGATCTATCCAACAATTATCTAACCGGAGAAATTCCCACGTTTTGGATTGGCATGCAGAGGTTACGAATCATTGATCTATCCAGAAGCATTCCTGAAGAGCTATGTCGTCTGCCTCTTCTCCACTTATTAGATCTTGCAGAAAACAACCTATCAGGATCTATTCCAGCATGTTTGGGTGATGTGCACGGTTTAATATTGCCGCAAACCTCCTTTATTCATACAATGTATTCATTAACCTCTAAGATCTTTGTGCCATACACAAGGCACATAGAGTTGGTCCTTAAAGGAAGAACAATTAAATACTGGAGCCAAATGCCGGTGCAATCCATCATTGATCCCTCTAATAATAATCTCTCTGGAGAGATACCAGACAACTTAACACAGTTATTTCACTTGGGTGCCCTTAATTTGTCCTGGAATCAAATAACTGGGAGCACACCCAGTAACATTGGATCATCAAAAGATTTAGAGAGTCTTGACCTTTCACACAATTATCTTATGTTTGGGACATTCATTGATCCATCAATTTATGTAGGCAACCCAAACCTTTATGGGGATCCATTACCAACTAATTGTGCATCATCGTTACCTGGAAATGGAGAGCAAGAAAGAAGACATGGGGATGATGAAGATGAAGATGAAGATGAAGATGATGACAAGACTGAAAGGATGGGGTTATATGCAAGCATAGCGATCGGGTACATAACAGGATTCTGGGTTGTTTGTGTCAAGCCTCTTCAGGCTCTAAAACCAAGTATTCTTTTACAGTCAAGCCTCTCCAGGCTCTACAACCAAGTATTCTTTTACAGTCAAGCCTCTCCAGGCTCTACAACCAAGTATTCTTTTACAGACAAGCCTCTCCAGGCTCAACAAATAAATACAGAGAAGATAAAATGCTTAAGCTTACAAACTATATCAATCTTGAAGCTTAAACAATTACAAATGTACAGAAAAACTGAGGTTGCTCCTGCCATAAGGCTGCTACAAATGTTGCTGCAGAGGCTGCGTTGCAGAGATTTCCTCAGTGGTACTAGAGGTGCCACGTCATCAAAAGACTTCAGACGGGTTGAACTACTTCAGACAGCTTCAACTCTTCAGACGAGTTCTGCTTCTTCAGACAGCTTCAACACTTAG 1638 0.4139 MKRCVCPLAMLLLLIVVLIGVAILTMFHVKDPIMQINNVKVTEFNPIGNTTLIADVSMKNTNFASFEYSNTTTTLYYRGIMVGEARWPPGKAKARHTLRMNTTMNLKGSVPHWYGLSALYLRNNMLSGTVPVNIGDEMLNLWYLDLSNNHLNGSIPLSINRIQYLRYLDLSNNYLTGEIPTFWIGMQRLRIIDLSRSIPEELCRLPLLHLLDLAENNLSGSIPACLGDVHGLILPQTSFIHTMYSLTSKIFVPYTRHIELVLKGRTIKYWSQMPVQSIIDPSNNNLSGEIPDNLTQLFHLGALNLSWNQITGSTPSNIGSSKDLESLDLSHNYLMFGTFIDPSIYVGNPNLYGDPLPTNCASSLPGNGEQERRHGDDEDEDEDEDDDKTERMGLYASIAIGYITGFWVVCVKPLQALKPSILLQSSLSRLYNQVFFYSQASPGSTTKYSFTDKPLQAQQINTEKIKCLSLQTISILKLKQLQMYRKTEVAPAIRLLQMLLQRLRCRDFLSGTRGATSSKDFRRVELLQTASTLQTSSASSDSFNT. 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11369 545 Gene3D Ribonuclease Inhibitor 92 365 IPR032675 -
Seca4g11369 545 SUPERFAMILY L domain-like 111 350 - -
Seca4g11369 545 MobiDBLite consensus disorder prediction 357 389 - -
Seca4g11369 545 Pfam Leucine Rich Repeat 165 180 IPR001611 GO:0005515
Seca4g11369 545 SUPERFAMILY LEA14-like 12 104 - -
Seca4g11369 545 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 107 197 - -
Seca4g11369 545 PANTHER LRR RECEPTOR-LIKE KINASE 105 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11369 Seca-Chr4 252425361 252428181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11369 106 408 Miscellaneous Gene Families AT3G53240 28.715 1.23e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11369 - - mtr:11441845 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11369 4 252425361 252428181 Seca4g11369 4 252425361 252428181 ECH