Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11356 ATGAAGAAGTTTGTGCTCAAGTTAGATTTGCATGATGACAGAGACAAGCAGAAGGCCCTGAAAAAAGTCGCAACTCTTTCAGGGATTGATGCAATCTCCATGGATATGAAAGAGAAGAAATTAACAGTGATAGGGACAGTAGATCCAGTGAATGTTGTGAGCAAATTGCGGAAATACTGGCAAACAGATATTATAGCAGTAGGACCAGCCAAGGAGCCTGAGAAGAAAGAGGATTCCAAGAAAGAAGAAGGCAAAAAGGAGGGAGGAAAGAAAGATGATCAAAAGAAGGAAGAGGGAAAGAAGGAAGAATCAAAGAAAGAAGAGAAGAAGGAAGAGAAAAAGGAGGATGAGAAGAAAAAAGAACCAGCCCCAGATCCTGTTTTGGAGTGGGTCAAGGCTTATAGGGCATATAATCCCTACATGACCACACACTACCATGTTCAAAGCATGGAAGAGAATCCCAATGCCTGTGTCATTTCTTAA 483 0.4141 MKKFVLKLDLHDDRDKQKALKKVATLSGIDAISMDMKEKKLTVIGTVDPVNVVSKLRKYWQTDIIAVGPAKEPEKKEDSKKEEGKKEGGKKDDQKKEEGKKEESKKEEKKEEKKEDEKKKEPAPDPVLEWVKAYRAYNPYMTTHYHVQSMEENPNACVIS. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11356 160 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Seca4g11356 160 Gene3D - 1 72 - -
Seca4g11356 160 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Seca4g11356 160 Coils Coil 94 121 - -
Seca4g11356 160 MobiDBLite consensus disorder prediction 69 126 - -
Seca4g11356 160 MobiDBLite consensus disorder prediction 67 128 - -
Seca4g11356 160 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11356 Seca-Chr4 252219414 252221278 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11356 - - gmx:100499838 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11356 4 252219414 252221278 Seca4g11356 4 252219414 252221278 ECH
Seca4g11356 4 252219414 252221278 Seca2g00921 2 14336747 14339523 PCT