Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11348 ATGGAGACACAAACAGATGGTAATGAGGACACTATAGCCACCATTAAAGAGATAAGGCAACAGCTTGAAACTCGCATAGAGTCCCAACACAAGGCTCACATGGACATGCTTGCTTCTATGCAAACCATAATACCCAATCTTGTCTCATCCCTTGACCTTTCTCTCAAGGTTGTCTCTTCTTTCAACCATCGTCCTTTTGCTCCTACACCTTCTCTGCCTCAACCAGATCCGAAATTGAATCCCAAAAAACCTATCGAACTAGCTCACCGTTCTAATGCTGAAACTTGCACCGATGGCTCTGTTGAGGCTGACTTGACAAATCCCAAGAATCAAAAGCCCAAAACATCTCTGGATTCAAACCCAGTTTGTCAGGTAGAATCTGAGAAGGTTAGTCCATTAGCGGTGGTTCGATCAATGGTTGCTGTTTGTCTGTTAGGGCGAGTACCATTCTCACCAATTGATTCTTCCACTGTGTTGAGGAAATTGGAGAATGATCAAACAGTGACACCTGTAGAGAAGGCTGCACTTCAGGAGCTTGGGGGGGATTCAGGGGCAACACTTGCAGTGGAGATAGCTTTGAGGTCAATGGCAGATGATAATGGTGGTGTTGAATTGGAGGAGTTTGTGGTGAGTGGAAAGGCAAGAATTATGGTTTTAAATATAGACCGAACTCGGCTCCTGAATGAATTGCCAGAGAGTGCACAGTATCAGCAACTTGAATCAAGTTCTGGAGATGGGAATGTGAATCAAAATCAAGGTCAGCAAATCACCACCAGTAGCACTAATGTGAATGGTGGTTTGCTTGGGATGAGAGGACCAGTTCTGAGGCCAATGTCTGATATGTGGATACCCCACGGGGACCCCCACATGTCAGGGTTGCAGCCAGTGTTTTCAGGAGGACCAAGGGGAGCACCCAGGGTAATGGGCATGATGGGGGCACATAGAGGTATAGGTATTCCGTCAATGCATAGACTCCCATTGGGGCCAAATGCATCAGGGAGTAGTCCTAATGCAATGCCACAGAAACCAAGAACTTTAGAGGATGATATGAAGGATCTTGAGGCTTTGTTGAACAAGAAATCATTTAGGGAGATGCAAAAATCCAAAACCGGGGAGGAGCTTTTGGACCTAATTCACCGACCAACTGCAAAGGAGACTGCTGTAGCTGCTAAGTTCAAAACAAAAGGTGGTTCTCAGGTGAGGCAATACTGTGACTTACTGACAAAAGAGGATTGTCGACGCCAGTCAGGTTCCTTTATAGCATGTGATAAGACATGCAAGTATGTTCACTATGAGTATGACCCTACACCTGATGTACCTCCAACAATGATGGGTGCTCCTCCTCCTCCTAAACCATTAAAGCCTCAACGTGCTGAATACTGTTCTGAAGTGGAACTTGGTGAACCACAATGGATCAACTGTGATATACGTAACTTTAGAATGGACATATTAGGTCAATTTGGAGTAATAATGGCAGATCCACCATGGGACATTCACATGGAACTGCCTTATGGAACAATGGCTGATGATGAAATGCGCAGTCTTAATGTCCCTGCTCTGCAAACTGATGGGCTTATTTTTCTATGGGTCACTGGACGTGCCATGGAACTTGGACGGGAATGGTATTTGTGCTTGTTTTTGGTCATATGA 1650 0.4515 METQTDGNEDTIATIKEIRQQLETRIESQHKAHMDMLASMQTIIPNLVSSLDLSLKVVSSFNHRPFAPTPSLPQPDPKLNPKKPIELAHRSNAETCTDGSVEADLTNPKNQKPKTSLDSNPVCQVESEKVSPLAVVRSMVAVCLLGRVPFSPIDSSTVLRKLENDQTVTPVEKAALQELGGDSGATLAVEIALRSMADDNGGVELEEFVVSGKARIMVLNIDRTRLLNELPESAQYQQLESSSGDGNVNQNQGQQITTSSTNVNGGLLGMRGPVLRPMSDMWIPHGDPHMSGLQPVFSGGPRGAPRVMGMMGAHRGIGIPSMHRLPLGPNASGSSPNAMPQKPRTLEDDMKDLEALLNKKSFREMQKSKTGEELLDLIHRPTAKETAVAAKFKTKGGSQVRQYCDLLTKEDCRRQSGSFIACDKTCKYVHYEYDPTPDVPPTMMGAPPPPKPLKPQRAEYCSEVELGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRSLNVPALQTDGLIFLWVTGRAMELGREWYLCLFLVI. 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11348 549 ProSiteProfiles MT-A70-like family profile. 449 549 IPR007757 -
Seca4g11348 549 MobiDBLite consensus disorder prediction 94 120 - -
Seca4g11348 549 MobiDBLite consensus disorder prediction 237 266 - -
Seca4g11348 549 Pfam MT-A70 487 538 IPR007757 -
Seca4g11348 549 MobiDBLite consensus disorder prediction 237 267 - -
Seca4g11348 549 PANTHER N6-ADENOSINE-METHYLTRANSFERASE 12 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11348 Seca-Chr4 252105958 252111790 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11348 K05925 - gmx:100782695 957.592