Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11314 ATGGCAACGGCGAAACCGAAACGTAACAACTTCCCGCCGATAACGGAATGCAACGGAACGACGTCGCCGCGTGAGTCCGTCGCCGCTGACCTCGACGGCACGCTCCTCATCTCCCGGAGCTCCTTCCCCTACTTCATGCTCGTCGCCGTCGAAGCTGGAAGCCTCCTCCGTGGCCTCATCCTCCTCCTCTCCGTCCCTTTCGTCATCTTCGCTTACCTTTTCGTCTCTGAATCCCTCGGCATCCAGATGCTAATCTTCATCTCCTTCTCCGGCCTCAAAATCCGTGACATCGAACTCGCTTCACGCGCTGTTCTCCCCAGGTTTTATGCTGCGGATGTGAGGAGGGAGAGCTTCGAGGTGTTTGACCGGTGCAAGAGAAAGGTAGTAGTGACGGCGAACCCGACGGTGATGGTGGAGCCGTTCGTGAAGGACTTTCTCGGCGGTGACAAGGTGCTGGGAACGGAGATCGAGGTCAATCCGAAAACCAAGAAAGCTACTGGGTTCGTGAAGAAGCCTGGTGTGCTGGTGGGAAAACTGAAGCAGTTGGCTATTTTGAAAGAGTTCGGTGAAGATTTGCCTGATATTGGGCTCGGAGATCGTAAAACTGATCACGATTTCATGTCTATTTGCAAGGTTTGGCTTCTGGAAGGGTACATGGTGCCTCCCAACAAATCAGCAAAACCAGTCCCACAAGAGCGTCTCAAGAGCCGGCTCATCTTCCACGACGGCCGCTTCGTGCAGAGACCAGACCCAATGAACGCCATCATCACCTTCACCTGGCTCCCCTTTGGCTTCATCCTCTCCATCATCAGGGTCTACTTCAACCTCCCTCTACCCGAACGCATCGTCCGCTACACCTACGAAATGCTGGGCATCAAGCTCGTCATCCGCGGCCACCGTCCACCACCACCATCTCCAGGCACCCCCGGCAACCTCTACGTCTGCAACCACCGCACCGCCCTCGATCCAATCGTCATTGCCATCGCCCTCGGCCGCAAGGTCTCCTGTGTCACCTACAGCGTCAGCAAACTCTCCCGCTTCCTCTCTCCTATCCCCGCCGTCGCCCTCACCCGTGACCGCGCAGCCGACGCCGCCCGCATTAAGGAGCTCCTCCAGAAGGGTGACCTCGTGGTGTGCCCTGAGGGCACCACGTGTCGAGAGCCCTTCTTGCTGCGGTTCAGTGCTCTGTTCGCGGAGCTGAGCGATAGAATCGTGCCCGTGGCTGTTGACTGCAAGCAGAACATGTTCTTTGGGACAACCGTACGTGGGATCAAGTTCTGGGACCCTTACTTCTTCTTCATGAATCCTAGACCTGTTTACGAGATTACCTTCCTTGAGCGGTTGCCGGAGGAGATGTCGTGTAAGGCTGGGGGGAAGTCATCGATTGAGGTGGCGAATCACGTGCAGAAGGTGTTGGGGGATGTGCTGGGGTTTGAGTGCACCGGATTGACTAGGAAAGATAAGTATATGTTGCTGGGAGGGAATGATGGGAAGGTGGAGTCTATGTACAGTGCCAAGAAGTGA 1524 0.561 MATAKPKRNNFPPITECNGTTSPRESVAADLDGTLLISRSSFPYFMLVAVEAGSLLRGLILLLSVPFVIFAYLFVSESLGIQMLIFISFSGLKIRDIELASRAVLPRFYAADVRRESFEVFDRCKRKVVVTANPTVMVEPFVKDFLGGDKVLGTEIEVNPKTKKATGFVKKPGVLVGKLKQLAILKEFGEDLPDIGLGDRKTDHDFMSICKVWLLEGYMVPPNKSAKPVPQERLKSRLIFHDGRFVQRPDPMNAIITFTWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIKLVIRGHRPPPPSPGTPGNLYVCNHRTALDPIVIAIALGRKVSCVTYSVSKLSRFLSPIPAVALTRDRAADAARIKELLQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQNMFFGTTVRGIKFWDPYFFFMNPRPVYEITFLERLPEEMSCKAGGKSSIEVANHVQKVLGDVLGFECTGLTRKDKYMLLGGNDGKVESMYSAKK. 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11314 507 CDD LPLAT 287 446 - -
Seca4g11314 507 Pfam haloacid dehalogenase-like hydrolase 28 207 - -
Seca4g11314 507 MobiDBLite consensus disorder prediction 1 22 - -
Seca4g11314 507 SMART plsc_2 311 412 IPR002123 GO:0016746
Seca4g11314 507 Pfam Acyltransferase 310 400 IPR002123 GO:0016746
Seca4g11314 507 FunFam Glycerol-3-phosphate 2-O-acyltransferase 6 109 232 - -
Seca4g11314 507 PANTHER ANCIENT UBIQUITOUS PROTEIN 25 501 - -
Seca4g11314 507 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 229 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11314 Seca-Chr4 251663671 251667808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11314 7 507 Acyl Lipid Metabolism Gene Families AT4G00400 80.040 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11314 K13508 - gmx:100794137 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11314 4 251663671 251667808 Seca4g11314 4 251663671 251667808 ECH