Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11290 ATGTCATTTATCTGTGGGCTTCCTATACTTGAGTGTGTTTATTGTCTGGCCTGTGCTCGTTGGGCTTGGAAAAAATGTCTGTACACTGCAGGCTATGAGAGTGAACATTGGGGCCTGGCTACTGCAGAAGAATTTGAGTCTGTGCCTCGAATCTGTCGTGTAATCTTGGCTGTCTATGAAGAAGATATTCGTAACCCCCAATGGGCTCCTCAAGGAGGTTATGGCATTAATCCTGACTGGATTATCTTGCGTAAGGACTATGGGGATAACCAAGGTCGTGTTACGCCATACATGATATACCTTGATCATGACCATGCTGAGATTATACTGGCTGTTAGTGGACTCAATTTAGCAAAGGAAAGTGATTATGCAGTTTTGCTTGATAACAAATTGGGACAGACAGAATTTCATGGTGGTTATGTTCATAATGGGTTATTGAAGGCAGCAGCCTGGGTTTTTGATGCAGAATATGAGGTTCTCAGGGAACTGGTGGCTGCAAATCCAAGTTATATGCTGTCATTTATTGGACATTCTCTAGGAGCTGGGGTGGTGGCATTGTTGACAATGCTGGCACTTCATAATCGAGACAAATTGGGGATACAAAGAAACAAGATAAGATGCTATGCGATAGCTCCTGCTCGATGCATGTCTCTCAATTTGGCTGTAAGATATGCGGATGTGATCAATTCTGTTGTACTACAGATCAATTTACTAGTTTTGTTCACTAATATTCTATACTTGTTTACTTTCCCAAACCAGGATGATTTTTTACCTCGGGCAACCACCGCTCTAGACGATGTCTTCAAGTCACTTTTATGTTGGCCCTGCTTATTGTGTCTAATGTGCTTAAAGGATACTTGCACGCTGGAGGAGAAGAAGCTTAGAGATCCAAGGCGTCTATACGCACCTGGTCGTCTCTATCACATTGTGGAGCGAAAGTTTGGAAGATTTCCACCAGTTGTTAGGACAGCAGTACCTGTTGATGGGAGATTTGATCATATAGTTCTTTCTTGCAATGCAACTTCTGACCATGCAATCCTGTGGATAGAGAGGGAATCCCAATGGGCTCTCGATTTAATGCTAGAGAAAGATCGGCACATGGAGATTCCAGCTGAGCAGAGGATGGAGAGGCAGGAATCTCTAGCTCGGGAACACAGTGAAGAGTACCGCGCAGCTCTTCAGAGAGCAGTTGCTTTGGATATTCCTCAAGCATATTCACCTTCCTCATATGGAACATTTCATGAAATGGATGCTGGGGAGGATTCTGGAAGATCAAGTGGCAAAAGCTCCTCCTTATCTTCTAAGAAACGAACAGAAAGCTGGAATGAGTTTGTTGGGCGCCTTTTTGATGTGGATGACTCAGGTCATATGGTGTTCAAGAAGACATCTCTGTAA 1395 0.4358 MSFICGLPILECVYCLACARWAWKKCLYTAGYESEHWGLATAEEFESVPRICRVILAVYEEDIRNPQWAPQGGYGINPDWIILRKDYGDNQGRVTPYMIYLDHDHAEIILAVSGLNLAKESDYAVLLDNKLGQTEFHGGYVHNGLLKAAAWVFDAEYEVLRELVAANPSYMLSFIGHSLGAGVVALLTMLALHNRDKLGIQRNKIRCYAIAPARCMSLNLAVRYADVINSVVLQINLLVLFTNILYLFTFPNQDDFLPRATTALDDVFKSLLCWPCLLCLMCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKFGRFPPVVRTAVPVDGRFDHIVLSCNATSDHAILWIERESQWALDLMLEKDRHMEIPAEQRMERQESLAREHSEEYRAALQRAVALDIPQAYSPSSYGTFHEMDAGEDSGRSSGKSSSLSSKKRTESWNEFVGRLFDVDDSGHMVFKKTSL. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11290 464 MobiDBLite consensus disorder prediction 423 439 - -
Seca4g11290 464 MobiDBLite consensus disorder prediction 410 439 - -
Seca4g11290 464 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Seca4g11290 464 Coils Coil 375 395 - -
Seca4g11290 464 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 462 - -
Seca4g11290 464 Pfam Lipase (class 3) 119 260 IPR002921 GO:0006629
Seca4g11290 464 SUPERFAMILY alpha/beta-Hydrolases 43 262 IPR029058 -
Seca4g11290 464 CDD Lipase_3 44 259 - -
Seca4g11290 464 Gene3D alpha/beta hydrolase 38 269 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11290 Seca-Chr4 251414408 251421486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g11290 1 464 Miscellaneous Gene Families AT3G49050 59.109 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11290 - - gmx:100800227 788.875