Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11285 ATGTACCACCCACAACCACAACCCAGAAACCAAATCCAACCCACAACCCTATCTTCTCAATTCACCCAAAAATGTCATTGCCATCACCTTAACCTTCTTCACCCTTCCAAACACAAACCCAAATTCAAAATCAAAATCACTTGTTCCTCCAAATCTTCTCCAATCGGAACCCTAATCTCCATCCTCCGCTCCATTCCAGACTGGGCAGACACCGTCAAGGAGCGTGGCATGCAGAAGAAGCGCACCCTTTACGACCACACCAATTGGGTCACTCACCGGAGCTCCCTCCGCCACGTTCGCCACTTCATCTCCAGCCTCTCCTCACGCGTCATCCTCTCCCTTGTCCCTCCTGTCATGGCCTTCACCGCCTTCGCCACCGCCATCGCCGCATATAACTCCGCCGTACTCCTCCACTTCCTCCCGGAGTTCTTCCCAGTCCTTAGGGCCTCTTCTCTCCCTTACCAGCTCACCGCTCCCGCCCTCGCCCTCCTTCTCGTGTTCCGCACTGAAGCTTCCTACTCCAGATTCGTGGAGGGCAAGAAGGCATGGACCACGGTCATTGCTGGGACCCAAGATTTTGCCAGACAGGTCATGGCTATGGTTGATGCTCCCTCTGACTTGCCTCTCAGGAAGGCGCTTTTGCATTATATCATGGCCTTCCCTCTAGTCCTCAAGTGTCATGTGTTGTATGGTTCAGATGTACGGAGAGATCTTCAACATTTGCTAGAAGTAGATGATCTAGCAGTGGTCCTGAATTCAAAACATCGACCTCGCTGTATTATTGAGTTTATATCACAAAGCATTCAGCTACTTAAATTGGAGGATTCTAGAAGAAATGTCCTGGAATCAAAGATCACTTGTTTCCATGAAGGAATTGGCATATGTGAACAACTTATGGGCATTCCCATTCCATTATCATATACTCGCTTGACCTCAAGGTTTCTTGTCCTATGGCATCTCACACTCCCTATCATACTTTGGGATGATTGCCATTGGATTGTGGTTCCTGCTACCTTTATTAGCGCTGCTTCTTTGTTCTGCATTGAAGAAGTATGTTCCTCTCCTTACCTTGAGTCCTTGACTATTTAA 1089 0.4858 MYHPQPQPRNQIQPTTLSSQFTQKCHCHHLNLLHPSKHKPKFKIKITCSSKSSPIGTLISILRSIPDWADTVKERGMQKKRTLYDHTNWVTHRSSLRHVRHFISSLSSRVILSLVPPVMAFTAFATAIAAYNSAVLLHFLPEFFPVLRASSLPYQLTAPALALLLVFRTEASYSRFVEGKKAWTTVIAGTQDFARQVMAMVDAPSDLPLRKALLHYIMAFPLVLKCHVLYGSDVRRDLQHLLEVDDLAVVLNSKHRPRCIIEFISQSIQLLKLEDSRRNVLESKITCFHEGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVCSSPYLESLTI. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11285 362 Coils Coil 362 362 - -
Seca4g11285 362 PANTHER UPF0187 PROTEIN YNEE 77 351 IPR044669 -
Seca4g11285 362 PIRSF UCP016988 11 355 IPR024701 GO:0005247|GO:0042548
Seca4g11285 362 Pfam Bestrophin, RFP-TM, chloride channel 92 352 IPR021134 GO:0005254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11285 Seca-Chr4 251378450 251381613 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11285 K08994 - gmx:100790216 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11285 4 251378450 251381613 Seca4g11285 4 251378450 251381613 ECH