Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11260 ATGACGAGATGGATTTTCTTCTCCATCACCATCTTGGTTGCATTTGTTGCAATCACTTTCGTTCTGGAAATTGACCTTTCCAAAATAACAAGCACTACTATACTGAAGACAATTATAGTTCTCAATAAGCAACAAGTCCAATTCCCACTGCACTGCACCAATGGAACCCCAGCAGCAACCTGCCCAGCATACTACCCAACAAACTTTGAGCTTGATGATGCTTCATCAACTACATCATGTCCAGAGTACTTCAGATGGATCCATGAAGATCTAAAACCATGGGAGAGTACAGGAATTACAAGGGATATGGTAGAAACAGCCAAAAATATGTCACATTTTAGGCTTGTGGTTGTAAATGGAAAAGCCTATATAGAGAAACATGCCAAATCATTTCAGACAAGGGATGTGTTCACAATATGGGGGATTTTACAGCTTCTAAGGCTATATCCAGGAAAGATACCTGATTTGGAGCTAATGTTTAGTTGTGGGGATAAGACTCTGGTGCACAAAAGAACTTTCCAAGGACCACAAGCCATGTCACCTCCACCTTTGTTCCATTACTGTGGAGATGAAAATTCCTATGATATTGTCTTCCCTGACTGGACCTTCTGGGGTTGGGCTGAGCTCAACATAAGACCATGGGAAACAACATTACAGAATCTACAAGAAGGCAACAAGATTGTCAAATGGGAGGATAGGATACCCTATGCTTTTTGGAAGGGCAACCCAGCAGTGTCTATTATTAGGAAAGAACTCAGCAAGTGCAACACCTCAGACGAACATGATTGGAATGCCAGAATATATGGCGTGCAATGGAAACAGGAGAAAGTGAAAAAATTCCAGGACACAAAACTAGAAGATCAATGTACTTATAAGTACAAGATTTATGCAGAAGGGGCTACATGGTCAGTGAGTGAAAAGTACATAATAGCATGTGACTCCATGACAATGTTCATAGAGCCAAGGTACTATGACTTCTTTACAAGAAGCATGGTACCTTTGCAACACTACTGGCCTATCAGTGTCAAAAACATGTGTGAAGAGATTAAGTATGCAGTGGACTGGGGCAATGCTAACCTTGACAGTGCACAGACAATTGGAAAAGGAGGAACTGACTACATCATAGATAATTTAAAGATGAAGTTTGTGTATGATTACATGTTTCATCTATTAAATAGTTATGCAAAGCTCTTGAGATTCAAACCAACCATACCTGAAGGAGCTGTTGAGTTTTGTTCTGAAAGTATGGCTTGTAACCTGCGTGGTCAAAGGAAGCATTACATGGTTGAGTCCATGGTGATGTCTCCAAGTGATACTCCTCCATGTTCAATGCCTCCTCCTTATACAACTGAAACTCTTAAAGAGTTTCTACAGAAAAAGGAGAATATAATCAAGCAAGTGAAGGCAAGGGCAGTGAATAAAGAGCAATGA 1431 0.4039 MTRWIFFSITILVAFVAITFVLEIDLSKITSTTILKTIIVLNKQQVQFPLHCTNGTPAATCPAYYPTNFELDDASSTTSCPEYFRWIHEDLKPWESTGITRDMVETAKNMSHFRLVVVNGKAYIEKHAKSFQTRDVFTIWGILQLLRLYPGKIPDLELMFSCGDKTLVHKRTFQGPQAMSPPPLFHYCGDENSYDIVFPDWTFWGWAELNIRPWETTLQNLQEGNKIVKWEDRIPYAFWKGNPAVSIIRKELSKCNTSDEHDWNARIYGVQWKQEKVKKFQDTKLEDQCTYKYKIYAEGATWSVSEKYIIACDSMTMFIEPRYYDFFTRSMVPLQHYWPISVKNMCEEIKYAVDWGNANLDSAQTIGKGGTDYIIDNLKMKFVYDYMFHLLNSYAKLLRFKPTIPEGAVEFCSESMACNLRGQRKHYMVESMVMSPSDTPPCSMPPPYTTETLKEFLQKKENIIKQVKARAVNKEQ. 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11260 476 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 56 468 - -
Seca4g11260 476 SMART cap10 152 401 IPR006598 -
Seca4g11260 476 Pfam Glycosyl transferase family 90 76 469 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11260 Seca-Chr4 251144756 251149662 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11260 - - gmx:100813234 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11260 4 251144756 251149662 Seca4g11260 4 251144756 251149662 ECH