Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11252 ATGTCTATGGCGTCTTCGGTTTCATCTTCTGAGGAAACGAGTTGGGGCCAAAGGGTATCCGAAAAGGTTCTTTCTTTCTACACTTCTCTTCCTAAGAAAGGCAAACCTCAAGGCCGTGAAGTCACTGTTTTGGCTGCTTTCCTTCTCTCTTCTCCTTCCAATGACTTGAAGGTTGTTGCTCTAGGAACGGGAACAAAGTGTATTGGACGCTCTCTCTTGCGCCCTTATGGTGACGTTGTTCATGATTCCCATGCTGAAGTTATAGCTCGAAGAGCTTTGATGAGATTCAACATCTTACTGAAACTAGTAGTAAGCATGCGCCTAGCAATGGAAGCAAACGGTTCAAAATTGATGATGGAAACTTAG 366 0.4426 MSMASSVSSSEETSWGQRVSEKVLSFYTSLPKKGKPQGREVTVLAAFLLSSPSNDLKVVALGTGTKCIGRSLLRPYGDVVHDSHAEVIARRALMRFNILLKLVVSMRLAMEANGSKLMMET. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11252 121 Pfam Adenosine-deaminase (editase) domain 60 96 IPR002466 GO:0003723|GO:0004000|GO:0006396
Seca4g11252 121 PANTHER EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN 10 96 - -
Seca4g11252 121 ProSiteProfiles Adenosine to inosine editase domain profile. 60 96 IPR002466 GO:0003723|GO:0004000|GO:0006396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11252 Seca-Chr4 251065071 251065936 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11252 K15440 - vum:124819838 190.66