Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11250 ATGAACAAGGACAACGAGACATATCTCAAACTCTTTTGGGGTGCTTCAAATCATCAGAAACGGGGTTTCTTGTCATCCAAAAAGGCCAAAGCTACAACAGTTACCACCACAGTCATTGTTCTGTTTTTCTTAATAGCCACTTTCTGTGTTCTTGCAGCCTTGAATACGTACACATTTGCAGGTATTTCCATTCTAAACCAGAACCTCTCATCCATCAACAGAGCCAAACCCCAAGAACAAGAATTTCCTCTTAGATGCACCAAAGGGGACAATGAGATACAAACATGCCCAAGAGACTACCCCACCACACATAACCCCACCAATAATCATAGTCCTCCACATAACCAAACATGTCCCTCATACTTCAGATTCATCCATGAAGATCTAAGGCCATGGAGAGAGAAAGGGATCACAAGGGAGATGTTGGAAGGGGCAAGAAGAACAGCACATTTTAGGCTTGTGATAGTGGAAGGGAAGGTGTATGTGGAGAAGTATAGGAAGTCAATTCAAACTAGAGATGTGTTCACTTTGTGGGGTATAATGCAACTTCTTAGGCTGTACCCTGGCAAGTTGCCTGATTTGGAGCTCATGTTTGATTGTGATGATAGACCTGTTATTCATGTGAACAATTTTCAAGGCCCAGATGCTGCCCCACCACCATTGTTTCGATATTGTTCAGATCAGGGGAGCATGGACATTGTGTTCCCAGATTGGTCCTTTTGGGGATGGGCAGAGACAAATATAAAACCATGGAGAGATATCCTGAAAGATATCAAAGAAGGGAACAAAAGGACTAGATGGAAGGATAGAGTACCATACGCCTATTGGAAGGGGAACCCCTTAGTCGCTTCAACTAGGAAAAACCTTATGAAATGCAATGTTACATCAAAAAATGACTGGAACACTCGTCTATACGTACAGGACTGGATAAAAGAAACCAATCAAGGGTACAAGAAATCCAACTTAGGGAACCAATGCACCCATAGGTATAAGATATACATAGAAGGATGGGCTTGGTCTGTAAGTGAGAAATACATTTTGGCATGTGATTCTATGACATTATATGTCAGGCCTAATTTCTATGATTTTTTCATAAGAGGCATGGTGCCATTACAACATTATTGGCCCATTAGAGATAATAGCAAGTGCACATCTCTTAAGTTTGCTGTGGAATGGGGCAATAACCATACTGATAAGGCACAAGCAATAGGGGAGGCTGCTAGCAAATTCATACATGAGGACTTGGACATGGACTATGTATATGATTACATGTTTCACCTACTAAATGAATATGCAAAGCTCTTAAGGTTCAAACCAACTATACCTCCAGGAGCTGTGGAGTTTTGTCCTGAAACAATGGCATGTGCTGTGAATGGTACACAAAGGAGGTTCATGGAGGAGTCAATGGTGAAGTTTCCTAGTGATTCAAATCCATGCACTATTCCTCCTCCATATGATCCTTTAACCCTTCAAGGCTTTCTAGAGAAAAAAGCTAATTCAACAAGACAAGTAGAAATTTGGGAAGATGTATATTGGCAGAGTTCTGTGTTCAATTTTGATTCTTCATGTTGTCTTCTGTGGTGGGACATGAGTGCATCATTCTTGAAAAGCATCAATGCCAGTGGAGGAATTAACTTTGTTGATATTACATTACAGAGAAGTAGTCCCGAAAGGCGAAGGGATAAGGTTTACATTGGCTGTGGAGCAGGGTTTGGTGGTGACAGGCCTTTGGCTGCTCTTAAGTTGCTTCAAAGAGTCCAAGAACTAAATTATCTGGTCCTTGAATGTCTAGCAGAGCGTACTCTAGCTGATCGCTACCAAATCATGGTGTCTGGTGGTGATGGTTATGATTCTCAGATTTCTAACTGGATGCATATGCTGCTGCCTCTGGCTGTGGAAAGAGGAACTTGCATAATTACCAATATGGGTGCTATGGATCCTCTGGGTGCTCAACAGAAGGTCTTGGAAATAGCTAGCACACTGGGGCTTAATATTTCTGTTGCTGTTGCTCATGAGGGTATCAGCACCTACTTGGGAGCTGCTCCTATTGTTCACTGTCTTGAAAATTACCAACCAGATGTAATAATTACTTCAAGAATTGCAGATGCTGCTTTATTCTTAGCACCTATGGTTTATGAACTAGGTTGGAACTGGGATGAATTAGAGCATCTAGCTCAAGGATCTCTTGCTGGCCATCTTCTAGAATGTGGTTGTCAACTCACAGGGGGATATTTCATGCACCCAGGAGACAAGTACCGGGATATGTCCTTCCAGCATCTACTGGATTTATCACTTCCTTATGCTGAAATCCGTTTTGATGGACAAGTATGTGTAGCCAAGGCTGAAGGTAGTGGGGGAGTTTTGAATTTCAATACATGTGCTGAACAATTACTCTATGAGATTGGAGACCCTAGTGCTTATGTGACCCCTGATGTAGTCATTGATTTTCAGGATGTTTCATTCCTTCCATTATCAAGCTGTAGAGTTCTCTGTCTTGGGGCAAAACCATCTACTATATCAGTTCCTGATAAACTTTTGCAGTTGGTTCCAGAGATCACTTTGCTCTGTCGCCCTAAATACTTCTTACAGGATTGTGGATGGAAAGGATGGGGAGAGATATCTTATGGAGGTTATGAATGTGTTAAACGTGCTGAAGCGGCTGAATATCTGGCTAGATCATGGATGGAAGAAATATTTCCTGGTCTTAATCACCATATACTTTCTTATATAATTGGGTTTGATAGCCTCAAAGCTTCTAGCAGCAATGGAAATGCTTCACCACAGAGGAATAGTGAGGATATTAGGTTACGCATGGATGGACTTTTTGAGCAGAAGGAACAAGCTGTTCAATTTGCTAGAGAATTTACAGCATTGTATACAAATGGACCAGCTGGTGGTGGTGGTATCAGTACTGGATATAAGAAAGAGGTTCTTCTAGAAAAACATTTGGTTAGGCGTGAAGATGTTTTCTGGCGAATTGGGATGAAGGGGAACACAAGAAGCCAAACAAATAAAGCAGTTGATCCTGAATGCAATCTGAGGTGTACATTGACATTGCCACCAGCACCAACATTACAAGCTGAAACTGACAAATCCTCCCAAGAATTTGTTTCCCCTGGAAGGAGTTGCTCACCTGCTCCATCTGGCCAGAAGATTCCACTTTACAATGTAGCACACAGCAGAGCTGGAGATAAAGGAAATGACATAAATTTTTCCCTAATACCACATTTTCCTGCTGATATTGAGAGGTTGAAACCAATTATTACATGTCAATGGGTAAAATCAGTGGTCTCACCTCTTCTGGATTTGTCTTCTTCTCCTGATATAGATGCAAGAAATCAAAGAGATAAATGGATCAATGAAAACGTTAGAGTGGAGATATATGAAGTTAAGGGAATCCAGGCATTGAATGTTGTTGTGAGGAACATCTTAGATGGCGGTGTGAACTGTTCTAGAAGAGTTGATAGGCATGGAAAGACCATTTCAGATCTCATACTGTGCCAACAAGTTGTGCTGCCTCCATAA 3525 0.415 MNKDNETYLKLFWGASNHQKRGFLSSKKAKATTVTTTVIVLFFLIATFCVLAALNTYTFAGISILNQNLSSINRAKPQEQEFPLRCTKGDNEIQTCPRDYPTTHNPTNNHSPPHNQTCPSYFRFIHEDLRPWREKGITREMLEGARRTAHFRLVIVEGKVYVEKYRKSIQTRDVFTLWGIMQLLRLYPGKLPDLELMFDCDDRPVIHVNNFQGPDAAPPPLFRYCSDQGSMDIVFPDWSFWGWAETNIKPWRDILKDIKEGNKRTRWKDRVPYAYWKGNPLVASTRKNLMKCNVTSKNDWNTRLYVQDWIKETNQGYKKSNLGNQCTHRYKIYIEGWAWSVSEKYILACDSMTLYVRPNFYDFFIRGMVPLQHYWPIRDNSKCTSLKFAVEWGNNHTDKAQAIGEAASKFIHEDLDMDYVYDYMFHLLNEYAKLLRFKPTIPPGAVEFCPETMACAVNGTQRRFMEESMVKFPSDSNPCTIPPPYDPLTLQGFLEKKANSTRQVEIWEDVYWQSSVFNFDSSCCLLWWDMSASFLKSINASGGINFVDITLQRSSPERRRDKVYIGCGAGFGGDRPLAALKLLQRVQELNYLVLECLAERTLADRYQIMVSGGDGYDSQISNWMHMLLPLAVERGTCIITNMGAMDPLGAQQKVLEIASTLGLNISVAVAHEGISTYLGAAPIVHCLENYQPDVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGDKYRDMSFQHLLDLSLPYAEIRFDGQVCVAKAEGSGGVLNFNTCAEQLLYEIGDPSAYVTPDVVIDFQDVSFLPLSSCRVLCLGAKPSTISVPDKLLQLVPEITLLCRPKYFLQDCGWKGWGEISYGGYECVKRAEAAEYLARSWMEEIFPGLNHHILSYIIGFDSLKASSSNGNASPQRNSEDIRLRMDGLFEQKEQAVQFAREFTALYTNGPAGGGGISTGYKKEVLLEKHLVRREDVFWRIGMKGNTRSQTNKAVDPECNLRCTLTLPPAPTLQAETDKSSQEFVSPGRSCSPAPSGQKIPLYNVAHSRAGDKGNDINFSLIPHFPADIERLKPIITCQWVKSVVSPLLDLSSSPDIDARNQRDKWINENVRVEIYEVKGIQALNVVVRNILDGGVNCSRRVDRHGKTISDLILCQQVVLPP. 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11250 1174 Pfam Glycosyl transferase family 90 114 508 IPR006598 -
Seca4g11250 1174 SMART cap10 190 438 IPR006598 -
Seca4g11250 1174 Pfam Acyclic terpene utilisation family protein AtuA 675 898 IPR010839 -
Seca4g11250 1174 Pfam Acyclic terpene utilisation family protein AtuA 565 669 IPR010839 -
Seca4g11250 1174 PANTHER PROPIONYL-COA CARBOXYLASE 552 1174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11250 Seca-Chr4 251045136 251057388 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11250 - - gmx:100790647 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11250 4 251045136 251057388 Seca4g11250 4 251045136 251057388 ECH