Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11230 ATGAAGAAGAAGATTCTTATTGTGGGAGGCACAGGTTACTTGGGTCAGCATCTGCTACAAGCCTTTGCTGATTCCACTTCCGATGGCAATGCTTTCACTCTCGCCTTCACTCACTACTCCGCTGAACCTTCCCGCCATTTGTTGTATGCCTTTCCTTCCGCCCTTCTTTTCCAACTCGATTTGAGATCCGGTAATGGATTTGATGTCATTTCCTCCGTTCTTGGCCAGCCTGATGTGGTTATCAATTGTGCTGCCATCTCTGTGCCTCGTGCCTGTGAAAATGATCCTGATACTGCACATGCTATTAATGTGCCATCTTCTCTTGTAAATTGGTTGCAAAGCTTTCAACAGAGCAGTACTCTCCTTATTCATCTCTCCACAGATCAAGTTTATGAAGGGGTGAAGTCCTTTTACAAGGAAGAAGACATTGCTGTTCCAGTAAATGTATATGGGAAAACTAAAGTGGAAGCAGAGAAGCTCATTTCAGAAAATTGCCAGAACTATGCAATTTTGAGAAGCAGTATCATCTATGGGCCACAAACAGTCGCACCAGTTCCAAAATCTCTTCCTATTCAGTGGATTGATGGTACCCTTGCTAAACGAGAAAAAGTGGAATTCTTTCATGATGAATTCCGTTGTCCAATATATGTTAAGGATCTTGTAGCTATCATACTAGCTTTAACCAACAAATGGATATCAGAGGGCAAGCAAATGCAATTGTTACTTAATGCCGGTGGACCTGATAGGGTATCACGTGTTCAAATGGCTGAGGCTGTTGCACAAGTAAGAGGGTATGACACCTCATTAATCAAACCAGTGTCTGCCTCATCGGTACGTATTGTGGTTGACCGAGGTGTGAAGTCCCCAGCTGACATATCTATGGATATCACTAGATTGGTTCAAACCCTAAATATTCATCCTGTTTCATTTAAAGATGGTGTCAGATTAACACTGACAACTAAATAA 966 0.4224 MKKKILIVGGTGYLGQHLLQAFADSTSDGNAFTLAFTHYSAEPSRHLLYAFPSALLFQLDLRSGNGFDVISSVLGQPDVVINCAAISVPRACENDPDTAHAINVPSSLVNWLQSFQQSSTLLIHLSTDQVYEGVKSFYKEEDIAVPVNVYGKTKVEAEKLISENCQNYAILRSSIIYGPQTVAPVPKSLPIQWIDGTLAKREKVEFFHDEFRCPIYVKDLVAIILALTNKWISEGKQMQLLLNAGGPDRVSRVQMAEAVAQVRGYDTSLIKPVSASSVRIVVDRGVKSPADISMDITRLVQTLNIHPVSFKDGVRLTLTTK. 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11230 321 CDD dTDP_HR_like_SDR_e 4 315 - -
Seca4g11230 321 Gene3D - 1 320 - -
Seca4g11230 321 Pfam RmlD substrate binding domain 4 319 IPR029903 -
Seca4g11230 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 319 IPR036291 -
Seca4g11230 321 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11230 Seca-Chr4 250845173 250848363 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11230 - - vra:106774087 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11230 4 250845173 250848363 Seca4g11230 4 250845173 250848363 ECH