Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11222 ATGGCGACGAAACGTTCCTCCGCCGTGCCTGAAAGTGTGTGTGCCTCGCCATCACTGAAAATCTCGAAGGAAGTGGACCCTCAACATGCTTCTGAGACCCTTTTGTTCGTTAGCCTTATGGGAGGTGGTGTCCCTGTTCCTCAAAACTGCAACACCCATGCCTTCTACGACCGCTTCTTTCGGAGTTTCATCAAAGTCGATCACATCCAACGCGGACAAATCTCTTGCACCATCCTCGCCAAAGCCCCTATCTGTAATGGCTATGGAACCCTTCATGGAGGGGCTGTTGGGTCCTTGGTTGAGGTTCTCTCTACTGCTTGTGCTAGAACTGTAGTTGCTGAAGACAAGGGACTTTTTCTAGGGGAAATTAGCATTTCATACCTCTCTGCCACTCCAATAAATGAAGAAGTACTAGCTAATGCCTCTGTAGTGAAGACTGGAAGAAATTTGACTGTAGTTGCCCTTGAGTTTAAACGAAAGAAAACCGGGAATTTGGTCTATATTACTCATGCTACCTTCTATAACATGCCAGTTGCCAGCTTATGA 546 0.4689 MATKRSSAVPESVCASPSLKISKEVDPQHASETLLFVSLMGGGVPVPQNCNTHAFYDRFFRSFIKVDHIQRGQISCTILAKAPICNGYGTLHGGAVGSLVEVLSTACARTVVAEDKGLFLGEISISYLSATPINEEVLANASVVKTGRNLTVVALEFKRKKTGNLVYITHATFYNMPVASL. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11222 181 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 64 174 IPR029069 -
Seca4g11222 181 CDD PaaI_thioesterase 64 174 - -
Seca4g11222 181 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 51 177 IPR039298 GO:0047617
Seca4g11222 181 FunFam Putative esterase F42H10.6 44 176 - -
Seca4g11222 181 Pfam Thioesterase superfamily 88 162 IPR006683 -
Seca4g11222 181 Gene3D Hotdog Thioesterase 46 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11222 Seca-Chr4 250785437 250788028 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11222 K17362 - gmx:100499764 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11222 4 250785437 250788028 Seca4g11222 4 250785437 250788028 ECH