Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g11213 | ATGGAGGCAAAACCTGCACATGCAGTTACCTTAGAGGTGAGCGTTATATCAGGACAAAACATATGCGTAGATCGAAGTTCAATGGCGGAGAACGTATATGTTGTTGTTCGTGCTGAGTCTCTGAATTGTTGCACGACCAAAATGGTGAATGAAGATAGAGGTTTACTTGCATGGAACGAGAAACTCTTGTTAGACATTCCCAATCATGCAAGGTCAGTGACGTTTGAGGTGCAGTGTAAGAAATACAAAGGAGTGCATCCTATTGGGGTAGCAAGAATAGCGCTTTCAGATTTTCTAACTGATGACAAAAGCAGTTCCCTTCAAATGTTGAGTTATGGGTTGAGGGATTGGGATGGGAAGAGAAATGGGGTTATTCATTTTTCTGTAAAGGTGAAGACACCGCAGGAAGAGAATCATTCTTGTTCAGAAATGAATTCTAGTGGATTAGCAGAGAATGAGGTTATGGGGTTTCAGGTAAAAAAATTCAAGTAA | 492 | 0.4085 | MEAKPAHAVTLEVSVISGQNICVDRSSMAENVYVVVRAESLNCCTTKMVNEDRGLLAWNEKLLLDIPNHARSVTFEVQCKKYKGVHPIGVARIALSDFLTDDKSSSLQMLSYGLRDWDGKRNGVIHFSVKVKTPQEENHSCSEMNSSGLAENEVMGFQVKKFK. | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g11213 | 163 | PANTHER | INGRESSION PROTEIN FIC1 | 10 | 140 | - | - | |
| Seca4g11213 | 163 | Pfam | C2 domain | 10 | 102 | IPR000008 | - | |
| Seca4g11213 | 163 | SMART | C2_3c | 10 | 107 | IPR000008 | - | |
| Seca4g11213 | 163 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 10 | 137 | IPR035892 | - | |
| Seca4g11213 | 163 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Seca4g11213 | 163 | Gene3D | C2 domain | 8 | 132 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca4g11213 | Seca-Chr4 | 250715434 | 250715925 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca4g11213 | - | - | gmx:100802552 | 208.379 |