Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11186 ATGGCTTTCAACTCCAGAAATGGATCAATCTTCTTAAATTCAAAAGTCATAGCTGATCATTCAACTTCATGGTACTGTGCTTTTATTCTTGTGGCCCTCGTTGTATTAAGCATGTATAGAGACGAGTCTCTATTTCCAAATCATGTAAATCATGCCAACTTCATAGATAGCCAACTCTTATCTCGGCCATGTGATGAAATCTATGTGGTTGGAGAAGGTGAGACACTTCACACAATCAGTGACAAGTGTGGTGACCCTTTTATAGTTGAGAATAACCCTCATATCCATGACCCTGATGATGTCTACCCCGGTCTCGTTATCAAGATTAAACCTTCACATCATATATAG 348 0.3908 MAFNSRNGSIFLNSKVIADHSTSWYCAFILVALVVLSMYRDESLFPNHVNHANFIDSQLLSRPCDEIYVVGEGETLHTISDKCGDPFIVENNPHIHDPDDVYPGLVIKIKPSHHI. 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11186 115 CDD LysM 67 109 IPR018392 -
Seca4g11186 115 PANTHER EMBRYO SAC 1 14 113 - -
Seca4g11186 115 Gene3D LysM domain 58 114 IPR036779 -
Seca4g11186 115 Pfam LysM domain 68 110 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11186 Seca-Chr4 250347314 250352605 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11186 - - gmx:100815990 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11186 4 250347314 250352605 Seca4g11186 4 250347314 250352605 ECH