Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11185 ATGGCAGATCAACCAGAGGGAACGGTGCAGAACATTCTGGAACAAGATTCTCTGAAGTGGGTCTTCGTTGGTGGCAAAGGTGGCGTCGGCAAAACTACCTGTAGTTCCATTCTCTCCATCCTTCTCGCCACTGTTCGCTCCTCTGTTCTCATCATCTCCACCGACCCTGCTCACAATCTCAGCGATGCTTTTCAACAACGCTTCACCAAAACCCCCACTTTGGTCAATGGCTTCTCCAATCTCTATGCCATGGTAGAGGTGGATCCTGCCGTTGAGTATGAGGACATGGGCGGTTCTGATGGAATGGATAGTTTGTTCTCAGAGCTAGCTGGTGCAATTCCTGGAATTGACGAGGCCATGAGCTTTGCTGAGATGCTCAAATTGGTGCAGACAATGGATTATTCTGTTATTGTATTTGATACTGCTCCCACTGGCCATACACTTAGACTATTGCAATTCCCATCAGTTTTAGAAAAGGGTCTTGCAAAGATGATGTCTTTGAAAAGCAAATTTGGTGGTTTGTTTAATCAGATGACTCGCATGTTTGGTATGGGTGAGGATTTTGGTGATGATGCGATTCTTGGGAGGCTTGAAGGCATGAAGGATGTAATCGAACAAGTTAATAAGCAATTCAAAGATCCTGACATGACAACCTTTGTCTGTGTTTGCATTCCCGAGTTCCTCTCACTTTATGAAACAGAGAGATTGGTTCAAGAACTTACAAAGTTTGAGATTGACACACACAATATCATCATTAATCAAGTAATCTTTGACGATGAAGATGTTGAATCCAAGTTACTTAAAGCAAGAATGAAAATGCAACAGAAGTATCTGGACCAGTTTTACATGTTGTATGATGACTTCAACATTACCAAGCTGCCATTGCTCCCAGAAGAGGTTACTGGCGTTGAAGCTCTGAAAGCATTTTCAAAACATTTTACAACCCCATATCAAGCCTTATGTAGTAGGGACCAAGTAGAACGGTTAGAGCGTAGAGTATCAGCACTACAACGCCAGTTAAAAGAGGCTGAAGAAGAATTGGAGAGAATCAAAAGGGGCTAG 1062 0.4303 MADQPEGTVQNILEQDSLKWVFVGGKGGVGKTTCSSILSILLATVRSSVLIISTDPAHNLSDAFQQRFTKTPTLVNGFSNLYAMVEVDPAVEYEDMGGSDGMDSLFSELAGAIPGIDEAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKMMSLKSKFGGLFNQMTRMFGMGEDFGDDAILGRLEGMKDVIEQVNKQFKDPDMTTFVCVCIPEFLSLYETERLVQELTKFEIDTHNIIINQVIFDDEDVESKLLKARMKMQQKYLDQFYMLYDDFNITKLPLLPEEVTGVEALKAFSKHFTTPYQALCSRDQVERLERRVSALQRQLKEAEEELERIKRG. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11185 353 Coils Coil 319 353 - -
Seca4g11185 353 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 10 334 IPR016300 GO:0005524|GO:0016887
Seca4g11185 353 FunFam ATPase ASNA1 1 322 - -
Seca4g11185 353 Gene3D - 1 329 IPR027417 -
Seca4g11185 353 Pfam Anion-transporting ATPase 19 312 IPR025723 -
Seca4g11185 353 Hamap ATPase <gene_name> [GET3]. 5 321 IPR027542 GO:0005524|GO:0016887
Seca4g11185 353 NCBIfam TRC40/GET3/ArsA family transport-energizing ATPase 22 312 IPR016300 GO:0005524|GO:0016887
Seca4g11185 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 308 IPR027417 -
Seca4g11185 353 CDD ArsA 34 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11185 Seca-Chr4 250338223 250344395 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11185 K01551 - gmx:100788968 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11185 4 250338223 250344395 Seca4g11185 4 250338223 250344395 ECH