Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11156 ATGGCACATGAAAACCACTTCATCAATGACACTGAACAACACCCTTCTAAATCTAATCTCCCCAAAGTCGTTCTTCATGGTCCTCCTGGATTTTCTTCATTGCTTCAACCCCATCCTTCTCACAACTTTCAAATCCTAAACCGCTCCTCTCAACCTCTCCACCAATTCTTCACCACCCACCCCCACCACGCCTCTGACCTCGCCGCCATACTCTGTACCGGAATCTACCCTGTCACCGCCGATCTCCTCCGCCTTCTCCCCTCGCTCCGTCTCGTCGTCACCGCCAGCGCCGGAACTGATCACATTGATCTCTCCGAGTGCCGCCGCCGAGGAATCCAGGTTGCCGGCGCCGGAAACCTCTTCTCTGAGGATGTCGCCGACATGGCTTTGGCTTTGTTGATTGACGTCATCTGGAAAATTTCCGCTGCGGATCGCTGTTTGAGAAGACGGCTTCAACCTCCTTCATTGGATTTTTCACTCGCTTCCAAGTTGACAGGAAAGAAAGTCGGAATTGTTGGTTTGGGAAAAATTGGCTTAGAAGTTGCACAGAGGCTTGAGGCGTTTGGTTGCATTGTATTATACAACTCTAGGAACAAAAAACCATTTGTTTCTTACCCTTTTTATTCTAGTGTTGTTGATCTTGCCACTAACAGCAATATACTCATTCTCTGTTGTGAACTAAACAACCAAACAAGGCACATTATCAACAGAGAAGTCATGTTGGCTCTGGGAAAAGAAGGAGTTATAGTGAATGTTGGAAGAGGGGCTCTGATAGATGAAAAGGAATTGGTGCGGTGTTTGATGGAAGGGGAGATTGGAGGTGCTGGTTTGGATGTGTTTGAGAATGAACCTCATGTTCCTAAAGAGTTATTTTCGTTGGATAATGTAGTCCTACAACCACATGCAGCTACCAGCACATTAGAGGCTTACATCGGTATCAGCCAACTTGTGGAACGCAATTTGGTAGCCTTCTTCTCAAATAAGCCTCTGATTACTCCAGCCATAGATGTTTAA 1014 0.4665 MAHENHFINDTEQHPSKSNLPKVVLHGPPGFSSLLQPHPSHNFQILNRSSQPLHQFFTTHPHHASDLAAILCTGIYPVTADLLRLLPSLRLVVTASAGTDHIDLSECRRRGIQVAGAGNLFSEDVADMALALLIDVIWKISAADRCLRRRLQPPSLDFSLASKLTGKKVGIVGLGKIGLEVAQRLEAFGCIVLYNSRNKKPFVSYPFYSSVVDLATNSNILILCCELNNQTRHIINREVMLALGKEGVIVNVGRGALIDEKELVRCLMEGEIGGAGLDVFENEPHVPKELFSLDNVVLQPHAATSTLEAYIGISQLVERNLVAFFSNKPLITPAIDV. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11156 337 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 64 331 IPR006139 GO:0016616|GO:0051287
Seca4g11156 337 FunFam Putative 2-hydroxyacid dehydrogenase 122 306 - -
Seca4g11156 337 MobiDBLite consensus disorder prediction 1 22 - -
Seca4g11156 337 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 61 149 - -
Seca4g11156 337 CDD HPPR 21 326 - -
Seca4g11156 337 Gene3D - 49 329 - -
Seca4g11156 337 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 21 330 - -
Seca4g11156 337 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 131 303 IPR006140 GO:0051287
Seca4g11156 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 304 IPR036291 -
Seca4g11156 337 Gene3D - 122 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11156 Seca-Chr4 250007518 250010406 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11156 K15919 - gmx:100777313 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11156 4 250007518 250010406 Seca4g11156 4 250007518 250010406 ECH