Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11103 ATGGCATCTGAATTGAATTTGAATATGCGGAGTGACGGTTATGTGAATGTTAATGATCTGCTAAAGCTGAACATGAAGACATTTGCTAATATTCCTCTAAGATCCCACACTATTGATGACATTAGGGAGGCTGTTCGAAAGGATAATAAGCAGCGCTTCAGCCTTATAGAAGAGAATGGAGAGCTACTAATTCGAGCAAACCAAGGCCACACATTAACGACTGTTGAAACTGAAAGCTTATTGAAACCAATCCTTTCAGCTGAAGAAGTTCCAGTTTGCGTACATGGAACCTACAGAAGGAACTTGGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATAAGTGGTAATGTTATATATTATTGA 417 0.3885 MASELNLNMRSDGYVNVNDLLKLNMKTFANIPLRSHTIDDIREAVRKDNKQRFSLIEENGELLIRANQGHTLTTVETESLLKPILSAEEVPVCVHGTYRRNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGNVIYY. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11103 138 Gene3D - 1 66 IPR042080 -
Seca4g11103 138 Pfam RNA 2'-phosphotransferase, Tpt1 / KptA family 2 133 IPR002745 GO:0016740
Seca4g11103 138 Gene3D - 92 135 IPR042081 -
Seca4g11103 138 PANTHER PUTATIVE PHOSPHOTRANSFERASE 1 133 IPR002745 GO:0016740
Seca4g11103 138 SUPERFAMILY ADP-ribosylation 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11103 Seca-Chr4 249307179 249309594 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11103 K10669 - gmx:100805163 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11103 4 249307179 249309594 Seca4g11103 4 249307179 249309594 ECH