Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11091 ATGTCTGCAGGTTGGTCAGCTGAAAATGCCAAGAGAGCTTATCTCCAGGCTCTCAAAATGGCCAAAAGGGGCAAAGAACCTGATGTAGCTGAGTTCATATCTGCTTTAGCAGCAGGCAAGAATGCCCAACTCATGGTGGTAGCCAGTGCCGGCGTGGCGGATTCCACCACACTAGCACTGGCTGCAGCTGCTCATCAAACTGGTGGCCGTGTGGTATGCATTTCTTGTGGGGAAAATGAATTGAAAGCATCAAAAAAAGCTCTAGGAGTTCATGGAGATAGTGTTGAGTTTGTTGTAGGAGATGTTAAGAGCCTTATGTTAGGTGGTGATTACAAAGGAGCTGATTTTGTGCTTGTGGATTGTGACATCACTAATGCAAGGGAAGTTTTTCTAGCAGCATTTAAAGGGGCCAACAAAGATGGTGCACTTGTTGTTGGATATAATGTTAGGCACAGAGCTTCACGGTGGAGACAATTGAAGGCATCATTTTTACCCATAGGAGAAGGGTTGCTGGTGACAAAAATTGATCCAATTGGGAAAGGTAATGTCCAAAGAAGGAGGAGTCGTTGGATTGTTCAAGTAGATAATTGCACCGGAGAGGAACATATTTTTAGGGTCACCTCTTCTTATAGAAAAGTGCAACTTCAAGTTTGA 654 0.4419 MSAGWSAENAKRAYLQALKMAKRGKEPDVAEFISALAAGKNAQLMVVASAGVADSTTLALAAAAHQTGGRVVCISCGENELKASKKALGVHGDSVEFVVGDVKSLMLGGDYKGADFVLVDCDITNAREVFLAAFKGANKDGALVVGYNVRHRASRWRQLKASFLPIGEGLLVTKIDPIGKGNVQRRRSRWIVQVDNCTGEEHIFRVTSSYRKVQLQV. 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11091 217 Gene3D Vaccinia Virus protein VP39 6 174 IPR029063 -
Seca4g11091 217 PANTHER DUF1442 FAMILY PROTEIN 4 205 IPR009902 -
Seca4g11091 217 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 60 159 IPR029063 -
Seca4g11091 217 Pfam Protein of unknown function (DUF1442) 4 205 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11091 Seca-Chr4 249199491 249200789 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11091 - - gmx:100783654 338.576