Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g11088 ATGAAGCTCGTTTGGTCTCCAGAAACAGCCTTAAAAGCTTACATAGACACTGTTAGATCGGTAAGCACCTTCAATCAGTGTGAGAAATTCAAGGAATCAGGAGTGGCTGAGCTTCTCTCTTCCATGGCTGCAGGATGGAACGCAAAGTTCATAGTAGAATGTTGGTCTCAAGACGGCCCCATCGCCGCAAGTGTCGGCTTGGCAGTTGCAGCTCGCAACACGGGTGCAAGACACGTGTGCATAGTCCCTGATGAACGGTCAAGATTGCACTACACGAAATCCCTAGCTGAGATGGGGGTTTCTCCTCCGCCACCGGAGATGGTGGTCGGCGAGGCGGAGGCGGTGATGGCGGGGCTGGACGGAGTGGATTTTCTGGTGGTGGACTGCAGGCAGAGGGACTTTGCTAGAGTTCTTAGGGTGGCTAAGGTGAGTCAAAGAGGGGCAGTTTTGGCATGTAAAAATGCATGGCAAAGAAACTTTTCAGGTTTCAGGTGGAACTGGGTGCTTGAAAGGGGCACGCGCGTGGTGAGATCGGTGTTCTTGCCTGTTGGGAAAGGTTTGGATATTGCTTACATAGGAAGTAGAAATGCTGCTGTTGCTGCAGTAACTGCCACAAAGGGTCCTAGCCGTTGGATCAAGCACATAGATCAACAATCAGGAGAAGAACACCTTTTCCGAAAGTAA 684 0.5088 MKLVWSPETALKAYIDTVRSVSTFNQCEKFKESGVAELLSSMAAGWNAKFIVECWSQDGPIAASVGLAVAARNTGARHVCIVPDERSRLHYTKSLAEMGVSPPPPEMVVGEAEAVMAGLDGVDFLVVDCRQRDFARVLRVAKVSQRGAVLACKNAWQRNFSGFRWNWVLERGTRVVRSVFLPVGKGLDIAYIGSRNAAVAAVTATKGPSRWIKHIDQQSGEEHLFRK. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g11088 227 Gene3D Vaccinia Virus protein VP39 24 191 IPR029063 -
Seca4g11088 227 Pfam Protein of unknown function (DUF1442) 1 227 IPR009902 -
Seca4g11088 227 PANTHER DUF1442 FAMILY PROTEIN 1 226 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g11088 Seca-Chr4 249183439 249184345 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g11088 - - psat:127107552 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g11088 4 249183439 249184345 Seca4g11088 4 249183439 249184345 ECH